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SUPERPOSE FRAGMENTS OF CRYSTAL STRUCTURES
The tool implements a fragment-based pharmacophore method, as published in Fidom K, et al (2015). Interacting ligand moiety - residue pairs extracted from selected crystal structures of GPCRs are superposed onto the input pdb file based on gpcrdb generic residue numbers. Resulting aligned ligand fragments can be used for placement of pharmacophore features.
Upload a pdb file you want to superpose the interacting moiety - residue pairs.
Once you have selected all your targets, click the green button.
For more information on this tool, see the docs.