CCR10 homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 6.21 docs)

VERSION

2018-07-10

MAIN TEMPLATE

PAR1 (sequence similarity: 38%) PDB: 3VW7

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 70.2 18.8 11.0
Side-chains 17.5 57.0 25.6

Number of backbone templates: 6
Number of rotamer templates: 34

NGL is a WebGL based 3D viewer powered by MMTF.

5LWE
3VW7
4ZUD
4XES
5UIW
4XT1
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 31 CCR9 5LWE CCR9 5LWE
N-term 32 CCR9 5LWE CCR9 5LWE
N-term 33 CCR9 5LWE CCR9 5LWE
N-term 34 CCR9 5LWE CCR9 5LWE
N-term 35 CCR9 5LWE CCR9 5LWE
TM1 36 1.27x27 CCR9 5LWE CCR9 5LWE
TM1 37 1.28x28 CCR9 5LWE - -
TM1 38 1.29x29 PAR1 3VW7 - -
TM1 39 1.30x30 PAR1 3VW7 P2Y1 receptor 4XNW
TM1 40 1.31x31 PAR1 3VW7 NTS1 receptor 4XES
TM1 41 1.32x32 PAR1 3VW7 - -
TM1 42 1.33x33 PAR1 3VW7 apelin receptor 5VBL
TM1 43 1.34x34 PAR1 3VW7 PAR1 3VW7
TM1 44 1.35x35 PAR1 3VW7 - -
TM1 45 1.36x36 PAR1 3VW7 PAR1 3VW7
TM1 46 1.37x37 PAR1 3VW7 PAR1 3VW7
TM1 47 1.38x38 PAR1 3VW7 PAR1 3VW7
TM1 48 1.39x39 PAR1 3VW7 ETB receptor 5X93
TM1 49 1.40x40 PAR1 3VW7 NTS1 receptor 4XES
TM1 50 1.41x41 PAR1 3VW7 H1 receptor 3RZE
TM1 51 1.42x42 PAR1 3VW7 PAR1 3VW7
TM1 52 1.43x43 PAR1 3VW7 A2A receptor 4UHR
TM1 53 1.44x44 PAR1 3VW7 FFA1 receptor 5TZY
TM1 54 1.45x45 PAR1 3VW7 PAF receptor 5ZKQ
TM1 55 1.46x46 PAR1 3VW7 μ receptor 6DDE
TM1 56 1.47x47 PAR1 3VW7 PAR1 3VW7
TM1 57 1.48x48 PAR1 3VW7 D4 receptor 5WIV
TM1 58 1.49x49 PAR1 3VW7 μ receptor 6DDE
TM1 59 1.50x50 PAR1 3VW7 PAR1 3VW7
TM1 60 1.51x51 PAR1 3VW7 PAR2 5NDD
TM1 61 1.52x52 PAR1 3VW7 μ receptor 6DDE
TM1 62 1.53x53 PAR1 3VW7 μ receptor 6DDE
TM1 63 1.54x54 PAR1 3VW7 NTS1 receptor 4XES
TM1 64 1.55x55 PAR1 3VW7 5-HT1B receptor 4IAQ
TM1 65 1.56x56 PAR1 3VW7 NTS1 receptor 4XES
TM1 66 1.57x57 PAR1 3VW7 - -
TM1 67 1.58x58 PAR1 3VW7 PAR2 5NDD
TM1 68 1.59x59 PAR1 3VW7 FFA1 receptor 5TZY
TM1 69 1.60x60 PAR1 3VW7 - -
ICL1 70 12.48x48 - - - -
ICL1 71 12.49x49 AT1 receptor 4ZUD β2-adrenoceptor 5JQH
ICL1 72 12.50x50 AT1 receptor 4ZUD - -
ICL1 73 12.51x51 - - - -
TM2 74 2.36x36 NTS1 receptor 4XES - -
TM2 75 2.37x37 PAR1 3VW7 P2Y1 receptor 4XNW
TM2 76 2.38x38 PAR1 3VW7 PAR1 3VW7
TM2 77 2.39x39 PAR1 3VW7 μ receptor 6DDE
TM2 78 2.40x40 PAR1 3VW7 P2Y1 receptor 4XNW
TM2 79 2.41x41 PAR1 3VW7 - -
TM2 80 2.42x42 PAR1 3VW7 NTS1 receptor 4XES
TM2 81 2.43x43 PAR1 3VW7 NTS1 receptor 4XES
TM2 82 2.44x44 PAR1 3VW7 PAR1 3VW7
TM2 83 2.45x45 PAR1 3VW7 - -
TM2 84 2.46x46 PAR1 3VW7 PAR1 3VW7
TM2 85 2.47x47 PAR1 3VW7 PAR1 3VW7
TM2 86 2.48x48 PAR1 3VW7 μ receptor 6DDE
TM2 87 2.49x49 PAR1 3VW7 PAR1 3VW7
TM2 88 2.50x50 PAR1 3VW7 PAR1 3VW7
TM2 89 2.51x51 PAR1 3VW7 NTS1 receptor 4XES
TM2 90 2.52x52 PAR1 3VW7 PAR1 3VW7
TM2 91 2.53x53 PAR1 3VW7 FFA1 receptor 5TZY
TM2 92 2.54x54 PAR1 3VW7 Y1 receptor 5ZBH
TM2 93 2.55x55 PAR1 3VW7 P2Y1 receptor 4XNW
TM2 94 2.56x56 PAR1 3VW7 μ receptor 6DDE
TM2 95 2.57x57 PAR1 3VW7 PAR1 3VW7
TM2 96 2.58x58 PAR1 3VW7 PAR1 3VW7
TM2 97 2.59x59 PAR1 3VW7 PAR1 3VW7
TM2 98 2.60x60 PAR1 3VW7 5-HT2B receptor 4IB4
TM2 99 2.61x61 PAR1 3VW7 FFA1 receptor 5TZY
TM2 100 2.62x62 PAR1 3VW7 PAR2 5NDD
TM2 101 2.63x63 PAR1 3VW7 - -
TM2 102 2.64x64 PAR1 3VW7 FFA1 receptor 5TZY
TM2 103 2.65x65 PAR1 3VW7 FFA1 receptor 5TZY
TM2 104 2.66x66 PAR1 3VW7 C5a1 receptor 5O9H
ECL1 105 23.49x49 - - - -
ECL1 106 23.50x50 CCR5 5UIW CCR5 5UIW
ECL1 107 23.51x51 CCR5 5UIW BLT1 receptor 5X33
ECL1 108 23.52x52 - - - -
TM3 109 3.21x21 PAR1 3VW7 PAR1 3VW7
TM3 110 3.22x22 PAR1 3VW7 PAR1 3VW7
TM3 111 3.23x23 PAR1 3VW7 P2Y1 receptor 4XNW
TM3 112 3.24x24 PAR1 3VW7 LPA1 receptor 4Z35
TM3 113 3.25x25 PAR1 3VW7 PAR1 3VW7
TM3 114 3.26x26 PAR1 3VW7 PAR1 3VW7
TM3 115 3.27x27 PAR1 3VW7 NOP receptor 5DHG
TM3 116 3.28x28 PAR1 3VW7 A2A receptor 4UHR
TM3 117 3.29x29 PAR1 3VW7 P2Y12 receptor 4NTJ
TM3 118 3.30x30 PAR1 3VW7 PAR2 5NDD
TM3 119 3.31x31 PAR1 3VW7 NTS1 receptor 4XES
TM3 120 3.32x32 PAR1 3VW7 CCR9 5LWE
TM3 121 3.33x33 PAR1 3VW7 AT1 receptor 4ZUD
TM3 122 3.34x34 PAR1 3VW7 NTS1 receptor 4XES
TM3 123 3.35x35 PAR1 3VW7 BLT1 receptor 5X33
TM3 124 3.36x36 PAR1 3VW7 CCR9 5LWE
TM3 125 3.37x37 PAR1 3VW7 - -
TM3 126 3.38x38 PAR1 3VW7 PAR1 3VW7
TM3 127 3.39x39 PAR1 3VW7 FFA1 receptor 5TZY
TM3 128 3.40x40 PAR1 3VW7 - -
TM3 129 3.41x41 PAR1 3VW7 PAR1 3VW7
TM3 130 3.42x42 PAR1 3VW7 P2Y1 receptor 4XNW
TM3 131 3.43x43 PAR1 3VW7 μ receptor 6DDE
TM3 132 3.44x44 PAR1 3VW7 NTS1 receptor 4XES
TM3 133 3.45x45 PAR1 3VW7 P2Y1 receptor 4XNW
TM3 134 3.46x46 PAR1 3VW7 PAR1 3VW7
TM3 135 3.47x47 PAR1 3VW7 PAR1 3VW7
TM3 136 3.48x48 PAR1 3VW7 P2Y1 receptor 4XNW
TM3 137 3.49x49 PAR1 3VW7 PAR1 3VW7
TM3 138 3.50x50 PAR1 3VW7 PAR1 3VW7
TM3 139 3.51x51 PAR1 3VW7 μ receptor 6DDE
TM3 140 3.52x52 PAR1 3VW7 NOP receptor 5DHG
TM3 141 3.53x53 PAR1 3VW7 PAR1 3VW7
TM3 142 3.54x54 PAR1 3VW7 NTS1 receptor 4XES
TM3 143 3.55x55 PAR1 3VW7 FFA1 receptor 5TZY
TM3 144 3.56x56 PAR1 3VW7 PAF receptor 5ZKQ
ICL2 145 - - - -
ICL2 146 - - - -
ICL2 147 - - - -
ICL2 148 - - - -
ICL2 149 - - - -
ICL2 150 - - - -
ICL2 151 - - - -
ICL2 152 - - - -
ICL2 153 - - - -
TM4 154 4.38x38 PAR1 3VW7 PAR1 3VW7
TM4 155 4.39x39 PAR1 3VW7 μ receptor 6DDE
TM4 156 4.40x40 PAR1 3VW7 PAR1 3VW7
TM4 157 4.41x41 PAR1 3VW7 PAR1 3VW7
TM4 158 4.42x42 PAR1 3VW7 PAR1 3VW7
TM4 159 4.43x43 PAR1 3VW7 - -
TM4 160 4.44x44 PAR1 3VW7 US28 4XT1
TM4 161 4.45x45 PAR1 3VW7 μ receptor 6DDE
TM4 162 4.46x46 PAR1 3VW7 P2Y1 receptor 4XNW
TM4 163 4.47x47 PAR1 3VW7 μ receptor 6DDE
TM4 164 4.48x48 PAR1 3VW7 A2A receptor 4UHR
TM4 165 4.49x49 PAR1 3VW7 P2Y1 receptor 4XNW
TM4 166 4.50x50 PAR1 3VW7 PAR1 3VW7
TM4 167 4.51x51 PAR1 3VW7 P2Y1 receptor 4XNW
TM4 168 4.52x52 PAR1 3VW7 PAR1 3VW7
TM4 169 4.53x53 PAR1 3VW7 μ receptor 6DDE
TM4 170 4.54x54 PAR1 3VW7 PAR2 5NDD
TM4 171 4.55x55 PAR1 3VW7 NTS1 receptor 4XES
TM4 172 4.56x56 PAR1 3VW7 NTS1 receptor 4XES
TM4 173 4.57x57 PAR1 3VW7 NTS1 receptor 4XES
TM4 174 4.58x59 PAR1 3VW7 FFA1 receptor 5TZY
TM4 175 4.59x60 PAR1 3VW7 PAR1 3VW7
TM4 176 4.60x61 PAR1 3VW7 AT1 receptor 4ZUD
TM4 177 4.61x62 PAR1 3VW7 PAR1 3VW7
TM4 178 4.62x63 PAR1 3VW7 PAR1 3VW7
TM4 179 4.63x64 PAR1 3VW7 - -
TM4 180 4.64x65 CCR5 5UIW - -
ECL2 181 - - - -
ECL2 182 CCR5 5UIW - -
ECL2 183 CCR5 5UIW - -
ECL2 184 CCR5 5UIW - -
ECL2 185 CCR5 5UIW - -
ECL2 186 CCR5 5UIW - -
ECL2 187 CCR5 5UIW - -
ECL2 188 CCR5 5UIW - -
ECL2 189 CCR5 5UIW - -
ECL2 190 - - - -
ECL2 191 45.50x50 PAR1 3VW7 PAR1 3VW7
ECL2 192 45.51x51 PAR1 3VW7 D4 receptor 5WIV
ECL2 193 45.52x52 PAR1 3VW7 μ receptor 6DDE
ECL2 194 - - - -
ECL2 195 - - - -
ECL2 196 - - - -
ECL2 197 - - - -
ECL2 198 - - - -
ECL2 199 - - - -
ECL2 200 - - - -
ECL2 201 - - - -
TM5 202 5.33x34 PAR1 3VW7 - -
TM5 203 5.34x35 PAR1 3VW7 - -
TM5 204 5.35x36 PAR1 3VW7 CCR5 5UIW
TM5 205 5.36x37 PAR1 3VW7 5-HT2B receptor 4IB4
TM5 206 5.37x38 PAR1 3VW7 C5a1 receptor 5O9H
TM5 207 5.38x39 PAR1 3VW7 - -
TM5 208 5.39x40 PAR1 3VW7 C5a1 receptor 5O9H
TM5 209 5.40x41 PAR1 3VW7 5-HT1B receptor 4IAQ
TM5 210 5.41x42 PAR1 3VW7 β2-adrenoceptor 3SN6
TM5 211 5.42x43 PAR1 3VW7 - -
TM5 212 5.43x44 PAR1 3VW7 PAF receptor 5ZKQ
TM5 213 5.44x45 PAR1 3VW7 - -
TM5 214 5.45x46 CCR5 5UIW CCR5 5UIW
TM5 215 5.46x461 CCR5 5UIW CCR5 5UIW
TM5 216 5.47x47 CCR5 5UIW CCR5 5UIW
TM5 217 5.48x48 PAR1 3VW7 - -
TM5 218 5.49x49 PAR1 3VW7 PAF receptor 5ZKQ
TM5 219 5.50x50 PAR1 3VW7 PAR1 3VW7
TM5 220 5.51x51 PAR1 3VW7 PAR1 3VW7
TM5 221 5.52x52 PAR1 3VW7 D3 receptor 3PBL
TM5 222 5.53x53 PAR1 3VW7 NTS1 receptor 4XES
TM5 223 5.54x54 PAR1 3VW7 5-HT2B receptor 4IB4
TM5 224 5.55x55 PAR1 3VW7 CCR5 5UIW
TM5 225 5.56x56 PAR1 3VW7 5-HT1B receptor 4IAQ
TM5 226 5.57x57 PAR1 3VW7 PAR1 3VW7
TM5 227 5.58x58 PAR1 3VW7 PAR1 3VW7
TM5 228 5.59x59 PAR1 3VW7 LPA6 receptor 5XSZ
TM5 229 5.60x60 PAR1 3VW7 μ receptor 6DDE
TM5 230 5.61x61 PAR1 3VW7 Rhodopsin 5DYS
TM5 231 5.62x62 PAR1 3VW7 - -
TM5 232 5.63x63 PAR1 3VW7 PAR1 3VW7
TM5 233 5.64x64 PAR1 3VW7 PAF receptor 5ZKQ
TM5 234 5.65x65 PAR1 3VW7 PAR1 3VW7
TM5 235 5.66x66 PAR1 3VW7 PAF receptor 5ZKQ
TM5 236 5.67x67 PAR1 3VW7 - -
TM5 237 5.68x68 US28 4XT1 C5a1 receptor 5O9H
ICL3 238 - - - -
ICL3 239 - - - -
ICL3 240 - - - -
ICL3 241 - - - -
TM6 242 6.30x30 PAR1 3VW7 FFA1 receptor 5TZY
TM6 243 6.31x31 PAR1 3VW7 μ receptor 6DDE
TM6 244 6.32x32 PAR1 3VW7 μ receptor 6DDE
TM6 245 6.33x33 PAR1 3VW7 5-HT2B receptor 4IB4
TM6 246 6.34x34 PAR1 3VW7 CCR9 5LWE
TM6 247 6.35x35 PAR1 3VW7 μ receptor 6DDE
TM6 248 6.36x36 PAR1 3VW7 NTS1 receptor 4XES
TM6 249 6.37x37 PAR1 3VW7 μ receptor 6DDE
TM6 250 6.38x38 PAR1 3VW7 P2Y1 receptor 4XNW
TM6 251 6.39x39 PAR1 3VW7 PAR1 3VW7
TM6 252 6.40x40 PAR1 3VW7 CXCR4 3ODU
TM6 253 6.41x41 PAR1 3VW7 PAR1 3VW7
TM6 254 6.42x42 PAR1 3VW7 μ receptor 6DDE
TM6 255 6.43x43 PAR1 3VW7 NTS1 receptor 4XES
TM6 256 6.44x44 PAR1 3VW7 μ receptor 6DDE
TM6 257 6.45x45 PAR1 3VW7 NTS1 receptor 4XES
TM6 258 6.46x46 CCR9 5LWE NTS1 receptor 4XES
TM6 259 6.47x47 CCR9 5LWE - -
TM6 260 6.48x48 PAR1 3VW7 CCR9 5LWE
TM6 261 6.49x49 PAR1 3VW7 NTS1 receptor 4XES
TM6 262 6.50x50 PAR1 3VW7 PAR1 3VW7
TM6 263 6.51x51 PAR1 3VW7 NTS1 receptor 4XES
TM6 264 6.52x52 PAR1 3VW7 OX2 receptor 5WS3
TM6 265 6.53x53 PAR1 3VW7 PAR2 5NDD
TM6 266 6.54x54 PAR1 3VW7 P2Y12 receptor 4NTJ
TM6 267 6.55x55 PAR1 3VW7 PAR1 3VW7
TM6 268 6.56x56 PAR1 3VW7 NTS1 receptor 4XES
TM6 269 6.57x57 PAR1 3VW7 CCR5 5UIW
TM6 270 6.58x58 PAR1 3VW7 CXCR4 3ODU
TM6 271 6.59x59 PAR1 3VW7 PAF receptor 5ZKQ
TM6 272 6.60x60 PAR1 3VW7 - -
TM6 273 6.61x61 PAR1 3VW7 CCR9 5LWE
TM6 274 6.62x62 PAR1 3VW7 PAR1 3VW7
TM6 275 6.63x63 CCR9 5LWE P2Y1 receptor 4XNW
TM6 276 6.64x64 CCR9 5LWE CCR9 5LWE
TM6 277 6.65x65 CCR9 5LWE - -
ECL3 278 - - - -
ECL3 279 CCR9 5LWE - -
ECL3 280 - - - -
TM7 281 7.24x23 CCR9 5LWE US28 5WB1
TM7 282 7.25x24 CCR9 5LWE CCR9 5LWE
TM7 283 7.26x25 CCR9 5LWE C5a1 receptor 5O9H
TM7 284 7.27x26 CCR9 5LWE P2Y12 receptor 4NTJ
TM7 285 7.28x27 PAR1 3VW7 NOP receptor 5DHG
TM7 286 7.29x28 PAR1 3VW7 5-HT2C receptor 6BQH
TM7 287 7.30x29 PAR1 3VW7 P2Y1 receptor 4XNW
TM7 288 7.31x30 PAR1 3VW7 - -
TM7 289 7.32x31 PAR1 3VW7 CCR9 5LWE
TM7 290 7.33x32 PAR1 3VW7 μ receptor 6DDE
TM7 291 7.34x33 PAR1 3VW7 PAR1 3VW7
TM7 292 7.35x34 PAR1 3VW7 5-HT2B receptor 4IB4
TM7 293 7.36x35 PAR1 3VW7 PAR1 3VW7
TM7 294 7.37x36 PAR1 3VW7 P2Y1 receptor 4XNW
TM7 295 7.38x37 PAR1 3VW7 P2Y1 receptor 4XNW
TM7 296 7.39x38 PAR1 3VW7 CB1 receptor 5XRA
TM7 297 7.40x39 PAR1 3VW7 P2Y1 receptor 4XNW
TM7 298 7.41x40 PAR1 3VW7 μ receptor 6DDE
TM7 299 7.42x41 PAR1 3VW7 P2Y1 receptor 4XNW
TM7 300 7.43x42 PAR1 3VW7 CB1 receptor 5XRA
TM7 301 7.44x43 PAR1 3VW7 NTS1 receptor 4XES
TM7 302 7.45x45 PAR1 3VW7 - -
TM7 303 7.46x46 PAR1 3VW7 PAR1 3VW7
TM7 304 7.47x47 PAR1 3VW7 5-HT2B receptor 4IB4
TM7 305 7.48x48 PAR1 3VW7 μ receptor 6DDE
TM7 306 7.49x49 PAR1 3VW7 μ receptor 6DDE
TM7 307 7.50x50 PAR1 3VW7 PAR1 3VW7
TM7 308 7.51x51 PAR1 3VW7 μ receptor 6DDE
TM7 309 7.52x52 PAR1 3VW7 μ receptor 6DDE
TM7 310 7.53x53 PAR1 3VW7 PAR1 3VW7
TM7 311 7.54x54 PAR1 3VW7 μ receptor 6DDE
TM7 312 7.55x55 CCR9 5LWE CCR9 5LWE
TM7 313 7.56x56 CCR9 5LWE PAF receptor 5ZKQ
H8 314 8.47x47 CCR9 5LWE CCR9 5LWE
H8 315 8.48x48 CCR9 5LWE - -
H8 316 8.49x49 CCR9 5LWE CCR9 5LWE
H8 317 8.50x50 CCR9 5LWE CCR9 5LWE
H8 318 8.51x51 CCR9 5LWE CCR9 5LWE
H8 319 8.52x52 CCR9 5LWE CCR9 5LWE
H8 320 8.53x53 CCR9 5LWE CCR9 5LWE
H8 321 8.54x54 CCR9 5LWE CCR9 5LWE
H8 322 8.55x55 CCR9 5LWE A2A receptor 4UHR
H8 323 8.56x56 CCR9 5LWE 5-HT2B receptor 4IB4
H8 324 8.57x57 CCR9 5LWE 5-HT1B receptor 4IAQ
H8 325 8.58x58 CCR9 5LWE PAR2 5NDD
H8 326 8.59x59 CCR9 5LWE A2A receptor 4UHR
H8 327 8.60x60 CCR9 5LWE - -
H8 328 8.61x61 CCR9 5LWE apelin receptor 5VBL
H8 329 8.62x62 CCR9 5LWE - -
H8 330 8.63x63 CCR9 5LWE - -
H8 331 8.64x64 CCR9 5LWE - -
H8 332 8.65x65 CCR9 5LWE CCR9 5LWE
H8 333 8.66x66 CCR9 5LWE - -
H8 334 8.67x67 CCR9 5LWE - -
C-term 335 - - - -
C-term 336 - - - -
C-term 337 - - - -
C-term 338 - - - -
C-term 339 - - - -