ADGRE5 homology model

PROTEIN CLASS

Class B2 (Adhesion)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 4.93 docs)

VERSION

2018-07-10

MAIN TEMPLATE

GLP-1 receptor (sequence similarity: 35%) PDB: 5NX2

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 81.5 4.6 13.9
Side-chains 22.4 13.5 64.1

Number of backbone templates: 3
Number of rotamer templates: 7

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5UZ7
5NX2
5VEW
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 530 - - - -
N-term 531 - - - -
N-term 532 - - - -
N-term 533 - - - -
N-term 534 - - - -
TM1 535 1.27x27 CT receptor 5UZ7 - -
TM1 536 1.28x28 CT receptor 5UZ7 - -
TM1 537 1.29x29 CT receptor 5UZ7 - -
TM1 538 1.30x30 CT receptor 5UZ7 - -
TM1 539 1.31x31 CT receptor 5UZ7 - -
TM1 540 1.32x32 CT receptor 5UZ7 - -
TM1 541 1.33x33 GLP-1 receptor 5NX2 - -
TM1 542 1.34x34 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 543 1.35x35 GLP-1 receptor 5NX2 - -
TM1 544 1.36x36 GLP-1 receptor 5NX2 - -
TM1 545 1.37x37 GLP-1 receptor 5NX2 - -
TM1 546 1.38x38 GLP-1 receptor 5NX2 - -
TM1 547 1.39x39 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 548 1.40x40 GLP-1 receptor 5NX2 - -
TM1 549 1.41x41 GLP-1 receptor 5NX2 - -
TM1 550 1.42x42 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 551 1.43x43 GLP-1 receptor 5NX2 - -
TM1 552 1.44x44 GLP-1 receptor 5NX2 - -
TM1 553 1.45x45 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 554 1.46x46 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 555 1.47x47 GLP-1 receptor 5NX2 - -
TM1 556 1.48x48 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 557 1.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 558 1.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 559 1.51x51 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM1 560 1.52x52 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM1 561 1.53x53 GLP-1 receptor 5NX2 - -
TM1 562 1.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 563 1.55x55 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM1 564 1.56x56 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM1 565 1.57x57 GLP-1 receptor 5NX2 - -
TM1 566 1.58x58 GLP-1 receptor 5NX2 - -
TM1 567 1.59x59 GLP-1 receptor 5NX2 - -
TM1 568 1.60x60 GLP-1 receptor 5NX2 - -
TM1 569 1.61x61 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM1 570 1.62x62 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 571 1.63x63 GLP-1 receptor 5NX2 - -
TM1 572 1.64x64 GLP-1 receptor 5NX2 - -
ICL1 573 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ICL1 574 GLP-1 receptor 5NX2 - -
ICL1 575 GLP-1 receptor 5NX2 - -
ICL1 576 GLP-1 receptor 5NX2 - -
TM2 577 2.44x44 GLP-1 receptor 5NX2 - -
TM2 578 2.45x45 GLP-1 receptor 5NX2 - -
TM2 579 2.46x46 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 580 2.47x47 GLP-1 receptor 5NX2 - -
TM2 581 2.48x48 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM2 582 2.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 583 2.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 584 2.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 585 2.52x52 GLP-1 receptor 5NX2 - -
TM2 586 2.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 587 2.54x54 GLP-1 receptor 5NX2 - -
TM2 588 2.55x55 GLP-1 receptor 5NX2 - -
TM2 589 2.56x56 GLP-1 receptor 5NX2 - -
TM2 590 2.57x57 GLP-1 receptor 5NX2 - -
TM2 591 2.58x58 GLP-1 receptor 5NX2 - -
TM2 592 2.59x59 GLP-1 receptor 5NX2 - -
TM2 593 2.60x60 GLP-1 receptor 5NX2 - -
TM2 594 2.61x61 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM2 595 2.62x62 GLP-1 receptor 5NX2 - -
TM2 596 2.63x63 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM2 597 2.64x64 GLP-1 receptor 5NX2 - -
TM2 598 2.65x65 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM2 599 2.66x66 GLP-1 receptor 5NX2 - -
TM2 600 2.67x67 GLP-1 receptor 5NX2 - -
TM2 601 2.68x68 GLP-1 receptor 5NX2 - -
TM2 602 2.69x69 GLP-1 receptor 5NX2 - -
TM2 603 2.70x70 GLP-1 receptor 5NX2 - -
ECL1 604 - - - -
ECL1 605 - - - -
ECL1 606 - - - -
ECL1 607 - - - -
ECL1 608 - - - -
ECL1 609 - - - -
TM3 610 3.27x27 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 611 3.28x28 GLP-1 receptor 5NX2 - -
TM3 612 3.29x29 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 613 3.30x30 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 614 3.31x31 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 615 3.32x32 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 616 3.33x33 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM3 617 3.34x34 GLP-1 receptor 5NX2 - -
TM3 618 3.35x35 GLP-1 receptor 5NX2 GLP-1 receptor 5VEW
TM3 619 3.36x36 GLP-1 receptor 5NX2 - -
TM3 620 3.37x37 GLP-1 receptor 5NX2 - -
TM3 621 3.38x38 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 622 3.39x39 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 623 3.40x40 GLP-1 receptor 5NX2 - -
TM3 624 3.41x41 GLP-1 receptor 5NX2 - -
TM3 625 3.42x42 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 626 3.43x43 GLP-1 receptor 5NX2 - -
TM3 627 3.44x44 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM3 628 3.45x45 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM3 629 3.46x46 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 630 3.47x47 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM3 631 3.48x48 GLP-1 receptor 5NX2 - -
TM3 632 3.49x49 GLP-1 receptor 5NX2 - -
TM3 633 3.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 634 3.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 635 3.52x52 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM3 636 3.53x53 GLP-1 receptor 5NX2 - -
TM3 637 3.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 638 3.55x55 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 639 3.56x56 GLP-1 receptor 5NX2 - -
TM3 640 3.57x57 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 641 3.58x58 GLP-1 receptor 5NX2 - -
TM3 642 3.59x59 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM3 643 3.60x60 GLP-1 receptor 5NX2 - -
ICL2 644 GLP-1 receptor 5NX2 - -
ICL2 645 GLP-1 receptor 5NX2 - -
ICL2 646 GLP-1 receptor 5NX2 - -
ICL2 647 GLP-1 receptor 5NX2 - -
TM4 648 4.38x39 GLP-1 receptor 5NX2 - -
TM4 649 4.39x40 GLP-1 receptor 5NX2 - -
TM4 650 4.40x41 GLP-1 receptor 5NX2 - -
TM4 651 4.41x42 GLP-1 receptor 5NX2 - -
TM4 652 4.42x43 GLP-1 receptor 5NX2 - -
TM4 653 4.43x44 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 654 4.44x45 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM4 655 4.45x46 GLP-1 receptor 5NX2 - -
TM4 656 4.46x47 GLP-1 receptor 5NX2 - -
TM4 657 4.47x48 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM4 658 4.48x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 659 4.49x491 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 660 4.50x50 GLP-1 receptor 5NX2 - -
TM4 661 4.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 662 4.52x52 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 663 4.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 664 4.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 665 4.55x55 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 666 4.56x56 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM4 667 4.57x57 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 668 4.58x58 GLP-1 receptor 5NX2 - -
TM4 669 4.59x59 GLP-1 receptor 5NX2 - -
TM4 670 4.60x60 GLP-1 receptor 5NX2 - -
TM4 671 4.61x61 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM4 672 4.62x62 GLP-1 receptor 5NX2 - -
TM4 673 4.63x63 GLP-1 receptor 5NX2 - -
TM4 674 4.64x64 GLP-1 receptor 5NX2 - -
TM4 675 4.65x65 GLP-1 receptor 5NX2 - -
TM4 676 4.66x66 GLP-1 receptor 5NX2 - -
TM4 677 4.67x67 GLP-1 receptor 5NX2 - -
TM4 678 4.68x68 GLP-1 receptor 5VEW - -
ECL2 679 - - - -
ECL2 680 - - - -
ECL2 681 - - - -
ECL2 682 - - - -
ECL2 683 - - - -
ECL2 684 45.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ECL2 685 45.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ECL2 686 45.52x52 GLP-1 receptor 5NX2 - -
ECL2 687 - - - -
ECL2 688 - - - -
TM5 689 5.32x32 - - - -
TM5 690 5.33x33 GLP-1 receptor 5NX2 - -
TM5 691 5.34x34 GLP-1 receptor 5NX2 - -
TM5 692 5.35x35 GLP-1 receptor 5NX2 - -
TM5 693 5.36x36 GLP-1 receptor 5NX2 - -
TM5 694 5.37x37 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 695 5.38x38 GLP-1 receptor 5NX2 - -
TM5 696 5.39x39 GLP-1 receptor 5NX2 - -
TM5 697 5.40x40 GLP-1 receptor 5NX2 - -
TM5 698 5.41x41 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM5 699 5.42x42 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 700 5.43x43 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM5 701 5.44x44 GLP-1 receptor 5NX2 - -
TM5 702 5.45x45 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 703 5.46x46 GLP-1 receptor 5NX2 - -
TM5 704 5.47x47 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 705 5.48x48 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM5 706 5.49x49 GLP-1 receptor 5NX2 - -
TM5 707 5.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 708 5.51x51 GLP-1 receptor 5NX2 - -
TM5 709 5.52x52 GLP-1 receptor 5NX2 - -
TM5 710 5.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 711 5.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 712 5.55x55 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 713 5.56x56 GLP-1 receptor 5NX2 - -
TM5 714 5.57x57 GLP-1 receptor 5NX2 - -
TM5 715 5.58x58 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM5 716 5.59x59 GLP-1 receptor 5NX2 - -
TM5 717 5.60x60 GLP-1 receptor 5NX2 - -
TM5 718 5.61x61 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM5 719 5.62x62 GLP-1 receptor 5NX2 - -
TM5 720 5.63x63 GLP-1 receptor 5NX2 - -
TM5 721 5.64x64 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 722 5.65x65 GLP-1 receptor 5NX2 - -
ICL3 723 - - - -
ICL3 724 - - - -
ICL3 725 - - - -
ICL3 726 - - - -
ICL3 727 - - - -
ICL3 729 - - - -
ICL3 730 - - - -
ICL3 731 - - - -
ICL3 732 - - - -
ICL3 733 - - - -
TM6 734 6.34x34 GLP-1 receptor 5NX2 - -
TM6 735 6.35x35 GLP-1 receptor 5NX2 GLP-1 receptor 5VEW
TM6 736 6.36x36 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM6 737 6.37x37 GLP-1 receptor 5NX2 - -
TM6 738 6.38x38 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 739 6.39x39 GLP-1 receptor 5NX2 - -
TM6 740 6.40x40 GLP-1 receptor 5NX2 - -
TM6 741 6.41x41 GLP-1 receptor 5NX2 - -
TM6 742 6.42x42 GLP-1 receptor 5NX2 - -
TM6 743 6.43x43 GLP-1 receptor 5NX2 - -
TM6 744 6.44x44 GLP-1 receptor 5NX2 - -
TM6 745 6.45x45 GLP-1 receptor 5NX2 - -
TM6 746 6.46x46 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM6 747 6.47x47 GLP-1 receptor 5NX2 - -
TM6 748 6.48x48 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 749 6.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 750 6.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 6B3J
TM6 751 6.51x51 GLP-1 receptor 5NX2 - -
TM6 752 6.52x52 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM6 753 6.53x53 GLP-1 receptor 5NX2 - -
TM6 754 6.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 755 6.55x55 GLP-1 receptor 5NX2 - -
TM6 756 6.56x56 GLP-1 receptor 5NX2 - -
TM6 757 6.57x57 GLP-1 receptor 5NX2 - -
TM6 758 6.58x58 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ECL3 759 - - - -
ECL3 760 - - - -
ECL3 761 - - - -
ECL3 762 - - - -
ECL3 763 - - - -
TM7 764 7.35x34 GLP-1 receptor 5NX2 - -
TM7 765 7.36x35 GLP-1 receptor 5NX2 - -
TM7 766 7.37x36 GLP-1 receptor 5NX2 GLP-1 receptor 5VAI
TM7 767 7.38x37 GLP-1 receptor 5NX2 - -
TM7 768 7.39x38 GLP-1 receptor 5NX2 - -
TM7 769 7.40x39 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM7 770 7.41x40 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM7 771 7.42x41 GLP-1 receptor 5NX2 - -
TM7 772 7.43x42 GLP-1 receptor 5NX2 - -
TM7 773 7.44x43 GLP-1 receptor 5NX2 - -
TM7 774 7.45x44 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM7 775 7.46x45 GLP-1 receptor 5NX2 - -
TM7 776 7.47x46 GLP-1 receptor 5NX2 - -
TM7 777 7.48x47 GLP-1 receptor 5NX2 - -
TM7 778 7.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 779 7.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 780 7.51x51 GLP-1 receptor 5NX2 - -
TM7 781 7.52x52 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM7 782 7.53x53 GLP-1 receptor 5NX2 - -
TM7 783 7.54x54 GLP-1 receptor 5NX2 - -
TM7 784 7.55x55 GLP-1 receptor 5NX2 - -
TM7 785 7.56x56 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 786 7.57x57 GLP-1 receptor 5NX2 - -
TM7 787 7.58x58 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 788 7.59x59 GLP-1 receptor 5NX2 - -
TM7 789 7.60x60 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
H8 790 8.47x47 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 791 8.48x48 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
H8 792 8.49x49 GLP-1 receptor 5NX2 - -
H8 793 8.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 794 8.51x51 GLP-1 receptor 5NX2 - -
H8 795 8.52x52 GLP-1 receptor 5NX2 - -
H8 796 8.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 797 8.54x54 GLP-1 receptor 5NX2 - -
H8 798 8.55x55 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 799 8.56x56 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 800 8.57x57 GLP-1 receptor 5NX2 - -
H8 801 8.58x58 GLP-1 receptor 5VEW - -
H8 802 8.59x59 GLP-1 receptor 5VEW - -
H8 803 8.60x60 GLP-1 receptor 5VEW - -
H8 804 8.61x61 GLP-1 receptor 5VEW - -
H8 805 8.62x62 GLP-1 receptor 5VEW - -
H8 806 8.63x63 GLP-1 receptor 5VEW - -
C-term 807 - - - -
C-term 808 - - - -
C-term 809 - - - -
C-term 810 - - - -
C-term 811 - - - -