GAL1 receptor homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Inactive (Δ distance (Å): -1.23 docs)

VERSION

2018-07-10

MAIN TEMPLATE

κ receptor (sequence similarity: 51%) PDB: 4DJH

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 84.3 7.0 8.7
Side-chains 29.8 52.2 18.1

Number of backbone templates: 5
Number of rotamer templates: 41

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4DJH
6B73
4ZJ8
3SN6
5C1M
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 26 - - - -
N-term 27 - - - -
N-term 28 - - - -
N-term 29 κ receptor 4DJH κ receptor 4DJH
N-term 30 κ receptor 4DJH κ receptor 4DJH
TM1 31 1.30x30 κ receptor 4DJH μ receptor 4DKL
TM1 32 1.31x31 κ receptor 4DJH M4 receptor 5DSG
TM1 33 1.32x32 κ receptor 4DJH - -
TM1 34 1.33x33 κ receptor 4DJH Y1 receptor 5ZBH
TM1 35 1.34x34 κ receptor 4DJH OX1 receptor 4ZJ8
TM1 36 1.35x35 κ receptor 4DJH S1P1 receptor 3V2Y
TM1 37 1.36x36 κ receptor 4DJH C5a1 receptor 5O9H
TM1 38 1.37x37 κ receptor 4DJH C5a1 receptor 5O9H
TM1 39 1.38x38 κ receptor 4DJH κ receptor 4DJH
TM1 40 1.39x39 κ receptor 4DJH C5a1 receptor 5O9H
TM1 41 1.40x40 κ receptor 4DJH Y1 receptor 5ZBH
TM1 42 1.41x41 κ receptor 4DJH apelin receptor 5VBL
TM1 43 1.42x42 κ receptor 4DJH β2-adrenoceptor 5JQH
TM1 44 1.43x43 κ receptor 4DJH κ receptor 4DJH
TM1 45 1.44x44 κ receptor 4DJH δ receptor 4N6H
TM1 46 1.45x45 κ receptor 4DJH apelin receptor 5VBL
TM1 47 1.46x46 κ receptor 4DJH κ receptor 4DJH
TM1 48 1.47x47 κ receptor 4DJH Y1 receptor 5ZBH
TM1 49 1.48x48 κ receptor 4DJH NOP receptor 5DHG
TM1 50 1.49x49 κ receptor 4DJH κ receptor 4DJH
TM1 51 1.50x50 κ receptor 4DJH κ receptor 4DJH
TM1 52 1.51x51 κ receptor 4DJH κ receptor 4DJH
TM1 53 1.52x52 κ receptor 4DJH κ receptor 4DJH
TM1 54 1.53x53 κ receptor 4DJH κ receptor 4DJH
TM1 55 1.54x54 κ receptor 4DJH Y1 receptor 5ZBH
TM1 56 1.55x55 κ receptor 4DJH β2-adrenoceptor 5JQH
TM1 57 1.56x56 κ receptor 4DJH κ receptor 4DJH
TM1 58 1.57x57 κ receptor 4DJH CCR5 5UIW
TM1 59 1.58x58 κ receptor 4DJH β2-adrenoceptor 5JQH
TM1 60 1.59x59 κ receptor 4DJH κ receptor 4DJH
TM1 61 1.60x60 κ receptor 4DJH apelin receptor 5VBL
ICL1 62 - - - -
ICL1 63 - - - -
ICL1 64 - - - -
ICL1 65 - - - -
ICL1 66 - - - -
ICL1 67 - - - -
TM2 68 2.37x37 κ receptor 4DJH CCR5 5UIW
TM2 69 2.38x38 κ receptor 4DJH D2 receptor 6CM4
TM2 70 2.39x39 κ receptor 4DJH κ receptor 4DJH
TM2 71 2.40x40 κ receptor 4DJH κ receptor 4DJH
TM2 72 2.41x41 κ receptor 4DJH BLT1 receptor 5X33
TM2 73 2.42x42 κ receptor 4DJH OX1 receptor 4ZJ8
TM2 74 2.43x43 κ receptor 4DJH κ receptor 4DJH
TM2 75 2.44x44 κ receptor 4DJH CCR5 5UIW
TM2 76 2.45x45 κ receptor 4DJH κ receptor 4DJH
TM2 77 2.46x46 κ receptor 4DJH κ receptor 4DJH
TM2 78 2.47x47 κ receptor 4DJH OX1 receptor 4ZJ8
TM2 79 2.48x48 κ receptor 4DJH CCR5 5UIW
TM2 80 2.49x49 κ receptor 4DJH κ receptor 4DJH
TM2 81 2.50x50 κ receptor 4DJH κ receptor 4DJH
TM2 82 2.51x51 κ receptor 4DJH apelin receptor 5VBL
TM2 83 2.52x52 κ receptor 4DJH A2A receptor 3VG9
TM2 84 2.53x53 κ receptor 4DJH P2Y1 receptor 4XNW
TM2 85 2.54x54 κ receptor 4DJH NOP receptor 5DHG
TM2 86 2.55x55 OX1 receptor 4ZJ8 NOP receptor 5DHG
TM2 87 2.56x551 OX1 receptor 4ZJ8 M1 receptor 5CXV
TM2 88 2.57x56 OX1 receptor 4ZJ8 OX1 receptor 4ZJ8
TM2 89 2.58x57 κ receptor 4DJH A2A receptor 3VG9
TM2 90 2.59x58 κ receptor 4DJH κ receptor 4DJH
TM2 91 2.60x59 κ receptor 4DJH κ receptor 4DJH
TM2 92 2.61x60 κ receptor 4DJH κ receptor 4DJH
TM2 93 2.62x61 κ receptor 4DJH apelin receptor 5VBL
TM2 94 2.63x62 κ receptor 4DJH κ receptor 4DJH
TM2 95 2.64x63 κ receptor 4DJH κ receptor 4DJH
TM2 96 2.65x64 κ receptor 4DJH κ receptor 4DJH
TM2 97 2.66x65 κ receptor 4DJH CCR5 5UIW
TM2 98 2.67x66 κ receptor 4DJH NOP receptor 5DHG
ECL1 99 - - - -
ECL1 100 23.49x49 κ receptor 4DJH OX2 receptor 5WS3
ECL1 101 23.50x50 κ receptor 4DJH κ receptor 4DJH
ECL1 102 23.51x51 κ receptor 4DJH Y1 receptor 5ZBH
ECL1 103 23.52x52 κ receptor 4DJH H1 receptor 3RZE
TM3 104 3.21x21 κ receptor 4DJH κ receptor 4DJH
TM3 105 3.22x22 κ receptor 4DJH ETB receptor 5X93
TM3 106 3.23x23 κ receptor 4DJH apelin receptor 5VBL
TM3 107 3.24x24 κ receptor 4DJH - -
TM3 108 3.25x25 κ receptor 4DJH κ receptor 4DJH
TM3 109 3.26x26 κ receptor 4DJH κ receptor 4DJH
TM3 110 3.27x27 κ receptor 4DJH β2-adrenoceptor 5JQH
TM3 111 3.28x28 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 112 3.29x29 κ receptor 4DJH CXCR4 3ODU
TM3 113 3.30x30 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 114 3.31x31 κ receptor 4DJH A2A receptor 3VG9
TM3 115 3.32x32 κ receptor 4DJH LPA6 receptor 5XSZ
TM3 116 3.33x33 κ receptor 4DJH OX2 receptor 5WS3
TM3 117 3.34x34 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 118 3.35x35 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 119 3.36x36 κ receptor 4DJH κ receptor 4DJH
TM3 120 3.37x37 κ receptor 4DJH - -
TM3 121 3.38x38 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 122 3.39x39 κ receptor 4DJH κ receptor 4DJH
TM3 123 3.40x40 κ receptor 4DJH κ receptor 4DJH
TM3 124 3.41x41 κ receptor 4DJH κ receptor 4DJH
TM3 125 3.42x42 κ receptor 4DJH κ receptor 4DJH
TM3 126 3.43x43 κ receptor 4DJH κ receptor 4DJH
TM3 127 3.44x44 κ receptor 4DJH CXCR4 3ODU
TM3 128 3.45x45 κ receptor 4DJH NOP receptor 5DHG
TM3 129 3.46x46 κ receptor 4DJH κ receptor 4DJH
TM3 130 3.47x47 κ receptor 4DJH κ receptor 4DJH
TM3 131 3.48x48 κ receptor 4DJH κ receptor 4DJH
TM3 132 3.49x49 κ receptor 4DJH κ receptor 4DJH
TM3 133 3.50x50 κ receptor 4DJH κ receptor 4DJH
TM3 134 3.51x51 κ receptor 4DJH κ receptor 4DJH
TM3 135 3.52x52 κ receptor 4DJH NOP receptor 5DHG
TM3 136 3.53x53 κ receptor 4DJH κ receptor 4DJH
TM3 137 3.54x54 κ receptor 4DJH OX1 receptor 4ZJ8
TM3 138 3.55x55 κ receptor 4DJH apelin receptor 5VBL
TM3 139 3.56x56 κ receptor 4DJH κ receptor 4DJH
ICL2 140 34.50x50 - - - -
ICL2 141 34.51x51 κ receptor 6B73 - -
ICL2 142 34.52x52 κ receptor 6B73 A2A receptor 3VG9
ICL2 143 34.53x53 κ receptor 6B73 BLT1 receptor 5X33
ICL2 144 34.54x54 κ receptor 6B73 5-HT1B receptor 4IAQ
ICL2 145 34.55x55 κ receptor 6B73 β2-adrenoceptor 3SN6
ICL2 146 34.56x56 κ receptor 6B73 A2A receptor 3VG9
ICL2 147 34.57x57 - - - -
TM4 148 4.38x38 κ receptor 4DJH - -
TM4 149 4.39x39 κ receptor 4DJH NOP receptor 5DHG
TM4 150 4.40x40 κ receptor 4DJH OX1 receptor 4ZJ8
TM4 151 4.41x41 κ receptor 4DJH μ receptor 4DKL
TM4 152 4.42x42 κ receptor 4DJH κ receptor 4DJH
TM4 153 4.43x43 κ receptor 4DJH D4 receptor 5WIV
TM4 154 4.44x44 κ receptor 4DJH δ receptor 4N6H
TM4 155 4.45x45 κ receptor 4DJH Y1 receptor 5ZBH
TM4 156 4.46x46 κ receptor 4DJH Rhodopsin 1GZM
TM4 157 4.47x47 κ receptor 4DJH D4 receptor 5WIV
TM4 158 4.48x48 κ receptor 4DJH κ receptor 4DJH
TM4 159 4.49x49 κ receptor 4DJH κ receptor 4DJH
TM4 160 4.50x50 κ receptor 4DJH κ receptor 4DJH
TM4 161 4.51x51 κ receptor 4DJH OX1 receptor 4ZJ8
TM4 162 4.52x52 κ receptor 4DJH κ receptor 4DJH
TM4 163 4.53x53 κ receptor 4DJH κ receptor 4DJH
TM4 164 4.54x54 κ receptor 4DJH 5-HT2C receptor 6BQH
TM4 165 4.55x55 κ receptor 4DJH OX1 receptor 4ZJ8
TM4 166 4.56x56 κ receptor 4DJH LPA1 receptor 4Z35
TM4 167 4.57x57 OX1 receptor 4ZJ8 apelin receptor 5VBL
TM4 168 4.58x59 OX1 receptor 4ZJ8 κ receptor 4DJH
TM4 169 4.59x60 κ receptor 4DJH OX1 receptor 4ZJ8
TM4 170 4.60x61 κ receptor 4DJH apelin receptor 5VBL
TM4 171 4.61x62 κ receptor 4DJH OX1 receptor 4ZJ8
TM4 172 4.62x63 κ receptor 4DJH AT2 receptor 5UNG
TM4 173 4.63x64 κ receptor 4DJH β2-adrenoceptor 5JQH
TM4 174 4.64x65 OX1 receptor 4ZJ8 Y1 receptor 5ZBQ
ECL2 175 κ receptor 4DJH κ receptor 4DJH
ECL2 176 κ receptor 4DJH - -
ECL2 177 κ receptor 4DJH - -
ECL2 178 κ receptor 4DJH - -
ECL2 179 κ receptor 4DJH - -
ECL2 180 κ receptor 4DJH - -
ECL2 181 κ receptor 4DJH - -
ECL2 182 κ receptor 4DJH - -
ECL2 183 κ receptor 4DJH - -
ECL2 184 κ receptor 4DJH - -
ECL2 185 κ receptor 4DJH - -
ECL2 186 κ receptor 4DJH - -
ECL2 187 45.50x50 κ receptor 4DJH κ receptor 4DJH
ECL2 188 45.51x51 κ receptor 4DJH - -
ECL2 189 45.52x52 κ receptor 4DJH OX1 receptor 4ZJ8
ECL2 190 - - - -
ECL2 191 - - - -
TM5 192 5.30x31 κ receptor 4DJH - -
TM5 193 5.31x32 κ receptor 4DJH C5a1 receptor 6C1R
TM5 194 5.32x33 κ receptor 4DJH FFA1 receptor 5TZY
TM5 195 5.33x34 κ receptor 4DJH C5a1 receptor 5O9H
TM5 196 5.34x35 κ receptor 4DJH Y1 receptor 5ZBH
TM5 197 5.35x36 κ receptor 4DJH CCR5 5UIW
TM5 198 5.36x37 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 199 5.37x38 κ receptor 4DJH β2-adrenoceptor 5JQH
TM5 200 5.38x39 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 201 5.39x40 κ receptor 4DJH Rhodopsin 1GZM
TM5 202 5.40x41 κ receptor 4DJH apelin receptor 5VBL
TM5 203 5.41x42 κ receptor 4DJH κ receptor 4DJH
TM5 204 5.42x43 κ receptor 4DJH H1 receptor 3RZE
TM5 205 5.43x44 κ receptor 4DJH κ receptor 4DJH
TM5 206 5.44x45 κ receptor 4DJH Y1 receptor 5ZBH
TM5 207 5.45x46 κ receptor 4DJH κ receptor 4DJH
TM5 208 5.46x461 κ receptor 4DJH apelin receptor 5VBL
TM5 209 5.47x47 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 210 5.48x48 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 211 5.49x49 κ receptor 4DJH CCR5 5UIW
TM5 212 5.50x50 κ receptor 4DJH κ receptor 4DJH
TM5 213 5.51x51 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 214 5.52x52 κ receptor 4DJH κ receptor 4DJH
TM5 215 5.53x53 κ receptor 4DJH OX1 receptor 4ZJ8
TM5 216 5.54x54 κ receptor 4DJH κ receptor 4DJH
TM5 217 5.55x55 κ receptor 4DJH M1 receptor 5CXV
TM5 218 5.56x56 κ receptor 4DJH β2-adrenoceptor 5JQH
TM5 219 5.57x57 κ receptor 4DJH κ receptor 4DJH
TM5 220 5.58x58 κ receptor 4DJH κ receptor 4DJH
TM5 221 5.59x59 κ receptor 4DJH BLT1 receptor 5X33
TM5 222 5.60x60 κ receptor 4DJH Y1 receptor 5ZBH
TM5 223 5.61x61 κ receptor 4DJH β2-adrenoceptor 5JQH
TM5 224 5.62x62 κ receptor 4DJH δ receptor 4N6H
TM5 225 5.63x63 κ receptor 4DJH NTS1 receptor 4BUO
TM5 226 5.64x64 κ receptor 4DJH AT2 receptor 5UNG
TM5 227 5.65x65 κ receptor 4DJH κ receptor 4DJH
TM5 228 5.66x66 κ receptor 4DJH CB1 receptor 5TGZ
TM5 229 5.67x67 κ receptor 4DJH A1 receptor 5UEN
TM5 230 5.68x68 κ receptor 4DJH ETB receptor 5X93
TM5 231 5.69x69 β2-adrenoceptor 3SN6 β2-adrenoceptor 3SN6
TM5 232 5.70x70 β2-adrenoceptor 3SN6 A2A receptor 3VG9
TM5 233 5.71x71 β2-adrenoceptor 3SN6 - -
TM5 234 5.72x72 β2-adrenoceptor 3SN6 A2A receptor 3VG9
ICL3 235 - - - -
ICL3 236 - - - -
ICL3 237 - - - -
ICL3 238 - - - -
ICL3 239 - - - -
ICL3 240 - - - -
TM6 241 6.29x29 κ receptor 4DJH δ receptor 4N6H
TM6 242 6.30x30 κ receptor 4DJH CXCR4 3ODU
TM6 243 6.31x31 κ receptor 4DJH Y1 receptor 5ZBH
TM6 244 6.32x32 κ receptor 4DJH OX1 receptor 4ZJ8
TM6 245 6.33x33 κ receptor 4DJH OX1 receptor 4ZJ8
TM6 246 6.34x34 κ receptor 4DJH OX1 receptor 4ZJ8
TM6 247 6.35x35 κ receptor 4DJH D2 receptor 6CM4
TM6 248 6.36x36 κ receptor 4DJH β2-adrenoceptor 5JQH
TM6 249 6.37x37 κ receptor 4DJH κ receptor 4DJH
TM6 250 6.38x38 κ receptor 4DJH κ receptor 4DJH
TM6 251 6.39x39 κ receptor 4DJH κ receptor 4DJH
TM6 252 6.40x40 κ receptor 4DJH κ receptor 4DJH
TM6 253 6.41x41 κ receptor 4DJH κ receptor 4DJH
TM6 254 6.42x42 κ receptor 4DJH apelin receptor 5VBL
TM6 255 6.43x43 κ receptor 4DJH κ receptor 4DJH
TM6 256 6.44x44 κ receptor 4DJH κ receptor 4DJH
TM6 257 6.45x45 κ receptor 4DJH - -
TM6 258 6.46x46 κ receptor 4DJH OX2 receptor 5WS3
TM6 259 6.47x47 κ receptor 4DJH CCR9 5LWE
TM6 260 6.48x48 κ receptor 4DJH κ receptor 4DJH
TM6 261 6.49x49 κ receptor 4DJH OX1 receptor 4ZJ8
TM6 262 6.50x50 κ receptor 4DJH κ receptor 4DJH
TM6 263 6.51x51 κ receptor 4DJH AT1 receptor 4ZUD
TM6 264 6.52x52 κ receptor 4DJH κ receptor 4DJH
TM6 265 6.53x53 κ receptor 4DJH κ receptor 4DJH
TM6 266 6.54x54 κ receptor 4DJH A2A receptor 3VG9
TM6 267 6.55x55 κ receptor 4DJH D2 receptor 6CM4
TM6 268 6.56x56 κ receptor 4DJH κ receptor 4DJH
TM6 269 6.57x57 κ receptor 4DJH - -
TM6 270 6.58x58 κ receptor 4DJH - -
TM6 271 6.59x59 κ receptor 4DJH - -
TM6 272 6.60x60 κ receptor 4DJH CCR5 5UIW
TM6 273 6.61x61 κ receptor 4DJH κ receptor 4DJH
ECL3 274 - - - -
ECL3 275 μ receptor 5C1M - -
ECL3 276 μ receptor 5C1M μ receptor 5C1M
ECL3 277 - - - -
TM7 278 7.28x27 κ receptor 6B73 μ receptor 4DKL
TM7 279 7.29x28 κ receptor 6B73 δ receptor 4N6H
TM7 280 7.30x29 κ receptor 6B73 κ receptor 6B73
TM7 281 7.31x30 κ receptor 4DJH - -
TM7 282 7.32x31 κ receptor 4DJH P2Y12 receptor 4NTJ
TM7 283 7.33x32 κ receptor 4DJH Y1 receptor 5ZBH
TM7 284 7.34x33 κ receptor 4DJH Rhodopsin 1GZM
TM7 285 7.35x34 κ receptor 4DJH BLT1 receptor 5X33
TM7 286 7.36x35 κ receptor 4DJH β2-adrenoceptor 5JQH
TM7 287 7.37x36 κ receptor 4DJH - -
TM7 288 7.38x37 κ receptor 4DJH A2A receptor 3VG9
TM7 289 7.39x38 κ receptor 4DJH OX1 receptor 4ZJ8
TM7 290 7.40x39 κ receptor 4DJH apelin receptor 5VBL
TM7 291 7.41x40 κ receptor 4DJH κ receptor 4DJH
TM7 292 7.42x41 κ receptor 4DJH Y1 receptor 5ZBH
TM7 293 7.43x42 κ receptor 4DJH κ receptor 4DJH
TM7 294 7.44x43 κ receptor 4DJH LPA6 receptor 5XSZ
TM7 295 7.45x45 κ receptor 4DJH κ receptor 4DJH
TM7 296 7.46x46 κ receptor 4DJH κ receptor 4DJH
TM7 297 7.47x47 κ receptor 4DJH κ receptor 4DJH
TM7 298 7.48x48 κ receptor 4DJH Y1 receptor 5ZBH
TM7 299 7.49x49 κ receptor 4DJH κ receptor 4DJH
TM7 300 7.50x50 κ receptor 4DJH κ receptor 4DJH
TM7 301 7.51x51 κ receptor 4DJH κ receptor 4DJH
TM7 302 7.52x52 κ receptor 4DJH OX1 receptor 4ZJ8
TM7 303 7.53x53 κ receptor 4DJH κ receptor 4DJH
TM7 304 7.54x54 κ receptor 4DJH κ receptor 4DJH
TM7 305 7.55x55 κ receptor 4DJH κ receptor 4DJH
TM7 306 7.56x56 κ receptor 4DJH κ receptor 4DJH
H8 307 8.47x47 κ receptor 4DJH OX1 receptor 4ZJ8
H8 308 8.48x48 κ receptor 4DJH μ receptor 4DKL
H8 309 8.49x49 κ receptor 4DJH κ receptor 4DJH
H8 310 8.50x50 κ receptor 4DJH κ receptor 4DJH
H8 311 8.51x51 κ receptor 4DJH OX1 receptor 4ZJ8
H8 312 8.52x52 κ receptor 4DJH H1 receptor 3RZE
H8 313 8.53x53 κ receptor 4DJH apelin receptor 5VBL
H8 314 8.54x54 κ receptor 4DJH - -
H8 315 8.55x55 κ receptor 4DJH OX1 receptor 4ZJ8
H8 316 8.56x56 κ receptor 4DJH LPA1 receptor 4Z36
H8 317 8.57x57 κ receptor 4DJH AT2 receptor 5UNG
H8 318 8.58x58 κ receptor 4DJH OX1 receptor 4ZJ8
H8 319 8.59x59 κ receptor 4DJH - -
C-term 320 κ receptor 4DJH κ receptor 4DJH
C-term 321 - - - -
C-term 322 - - - -
C-term 323 - - - -
C-term 324 - - - -