GPR26 homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 6.28 docs)

VERSION

2018-07-10

MAIN TEMPLATE

A2A receptor (sequence similarity: 40%) PDB: 4UHR

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 78.8 12.7 8.5
Side-chains 16.9 56.0 27.0

Number of backbone templates: 9
Number of rotamer templates: 41

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4U15
4UHR
6CM4
4XES
5WQC
5WS3
6DDF
3VW7
3SN6
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 1 - - - -
TM1 2 1.29x29 M3 receptor 4U15 CXCR4 3ODU
TM1 3 1.30x30 M3 receptor 4U15 CB1 receptor 5XRA
TM1 4 1.31x31 M3 receptor 4U15 5-HT1B receptor 4IAQ
TM1 5 1.32x32 A2A receptor 4UHR - -
TM1 6 1.33x33 A2A receptor 4UHR M1 receptor 5CXV
TM1 7 1.34x34 A2A receptor 4UHR β2-adrenoceptor 3SN6
TM1 8 1.35x35 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM1 9 1.36x36 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM1 10 1.37x37 A2A receptor 4UHR FFA1 receptor 5TZY
TM1 11 1.38x38 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM1 12 1.39x39 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM1 13 1.40x40 A2A receptor 4UHR FFA1 receptor 5TZY
TM1 14 1.41x41 A2A receptor 4UHR PAR1 3VW7
TM1 15 1.42x42 A2A receptor 4UHR - -
TM1 16 1.43x43 A2A receptor 4UHR BLT1 receptor 5X33
TM1 17 1.44x44 A2A receptor 4UHR D4 receptor 5WIV
TM1 18 1.45x45 A2A receptor 4UHR μ receptor 6DDE
TM1 19 1.46x46 A2A receptor 4UHR PAR1 3VW7
TM1 20 1.47x47 A2A receptor 4UHR PAR1 3VW7
TM1 21 1.48x48 A2A receptor 4UHR A2A receptor 4UHR
TM1 22 1.49x49 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM1 23 1.50x50 A2A receptor 4UHR A2A receptor 4UHR
TM1 24 1.51x51 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM1 25 1.52x52 A2A receptor 4UHR A2A receptor 4UHR
TM1 26 1.53x53 A2A receptor 4UHR A2A receptor 4UHR
TM1 27 1.54x54 A2A receptor 4UHR NTS1 receptor 4XES
TM1 28 1.55x55 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM1 29 1.56x56 A2A receptor 4UHR - -
TM1 30 1.57x57 A2A receptor 4UHR NTS1 receptor 4XES
TM1 31 1.58x58 A2A receptor 4UHR PAR2 5NDD
TM1 32 1.59x59 A2A receptor 4UHR CB1 receptor 5XRA
TM1 33 1.60x60 A2A receptor 4UHR apelin receptor 5VBL
ICL1 34 12.48x48 - - - -
ICL1 35 12.49x49 D2 receptor 6CM4 - -
ICL1 36 12.50x50 D2 receptor 6CM4 - -
ICL1 37 12.51x51 - - - -
TM2 38 2.36x36 NTS1 receptor 4XES - -
TM2 39 2.37x37 A2A receptor 4UHR - -
TM2 40 2.38x38 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM2 41 2.39x39 A2A receptor 4UHR ETB receptor 5X93
TM2 42 2.40x40 A2A receptor 4UHR FFA1 receptor 5TZY
TM2 43 2.41x41 A2A receptor 4UHR H1 receptor 3RZE
TM2 44 2.42x42 A2A receptor 4UHR A2A receptor 4UHR
TM2 45 2.43x43 A2A receptor 4UHR - -
TM2 46 2.44x44 A2A receptor 4UHR PAR1 3VW7
TM2 47 2.45x45 A2A receptor 4UHR μ receptor 6DDE
TM2 48 2.46x46 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM2 49 2.47x47 A2A receptor 4UHR PAF receptor 5ZKQ
TM2 50 2.48x48 A2A receptor 4UHR FFA1 receptor 5TZY
TM2 51 2.49x49 A2A receptor 4UHR ETB receptor 5X93
TM2 52 2.50x50 A2A receptor 4UHR A2A receptor 5WF5
TM2 53 2.51x51 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM2 54 2.52x52 A2A receptor 4UHR A2A receptor 4UHR
TM2 55 2.53x53 A2A receptor 4UHR - -
TM2 56 2.54x54 A2A receptor 4UHR FFA1 receptor 5TZY
TM2 57 2.55x55 A2A receptor 4UHR A2A receptor 4UHR
TM2 58 2.56x551 A2A receptor 4UHR H1 receptor 3RZE
TM2 59 2.57x56 A2A receptor 4UHR - -
TM2 60 2.58x57 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM2 61 2.59x58 A2A receptor 4UHR A2A receptor 4UHR
TM2 62 2.60x59 A2A receptor 4UHR PAR2 5NDD
TM2 63 2.61x60 A2A receptor 4UHR OX2 receptor 5WS3
TM2 64 2.62x61 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM2 65 2.63x62 A2A receptor 4UHR A2A receptor 4UHR
TM2 66 2.64x63 A2A receptor 4UHR - -
TM2 67 2.65x64 A2A receptor 4UHR - -
TM2 68 2.66x65 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM2 69 2.67x66 A2A receptor 4UHR FFA1 receptor 5TZY
TM2 70 2.68x67 D2 receptor 6CM4 PAF receptor 5ZKQ
ECL1 71 - - - -
ECL1 72 D2 receptor 6CM4 - -
ECL1 73 D2 receptor 6CM4 - -
ECL1 74 - - - -
TM3 75 3.21x21 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM3 76 3.22x22 A2A receptor 4UHR NTS1 receptor 4XES
TM3 77 3.23x23 A2A receptor 4UHR D4 receptor 5WIV
TM3 78 3.24x24 A2A receptor 4UHR 5-HT2B receptor 4NC3
TM3 79 3.25x25 A2A receptor 4UHR A2A receptor 4UHR
TM3 80 3.26x26 A2A receptor 4UHR PAR1 3VW7
TM3 81 3.27x27 A2A receptor 4UHR P2Y1 receptor 4XNW
TM3 82 3.28x28 A2A receptor 4UHR PAF receptor 5ZKQ
TM3 83 3.29x29 A2A receptor 4UHR A2A receptor 4UHR
TM3 84 3.30x30 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM3 85 3.31x31 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM3 86 3.32x32 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM3 87 3.33x33 A2A receptor 4UHR OX2 receptor 5WS3
TM3 88 3.34x34 A2A receptor 4UHR FFA1 receptor 5TZY
TM3 89 3.35x35 A2A receptor 4UHR A2A receptor 4UHR
TM3 90 3.36x36 A2A receptor 4UHR A1 receptor 5N2S
TM3 91 3.37x37 A2A receptor 4UHR A2A receptor 4UHR
TM3 92 3.38x38 A2A receptor 4UHR - -
TM3 93 3.39x39 A2A receptor 4UHR A2A receptor 4UHR
TM3 94 3.40x40 A2A receptor 4UHR - -
TM3 95 3.41x41 A2A receptor 4UHR PAR1 3VW7
TM3 96 3.42x42 A2A receptor 4UHR A2A receptor 4UHR
TM3 97 3.43x43 A2A receptor 4UHR PAR1 3VW7
TM3 98 3.44x44 A2A receptor 4UHR NTS1 receptor 4XES
TM3 99 3.45x45 A2A receptor 4UHR A2A receptor 4UHR
TM3 100 3.46x46 A2A receptor 4UHR NTS1 receptor 4XES
TM3 101 3.47x47 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM3 102 3.48x48 A2A receptor 4UHR A2A receptor 4UHR
TM3 103 3.49x49 A2A receptor 4UHR A2A receptor 4UHR
TM3 104 3.50x50 A2A receptor 4UHR A2A receptor 4UHR
TM3 105 3.51x51 A2A receptor 4UHR OX2 receptor 5WS3
TM3 106 3.52x52 A2A receptor 4UHR D4 receptor 5WIV
TM3 107 3.53x53 A2A receptor 4UHR A2A receptor 4UHR
TM3 108 3.54x54 A2A receptor 4UHR μ receptor 6DDE
TM3 109 3.55x55 A2A receptor 4UHR PAR1 3VW7
TM3 110 3.56x56 A2A receptor 4UHR FFA1 receptor 5TZY
ICL2 111 34.50x50 - - - -
ICL2 112 34.51x51 M3 receptor 4U15 M3 receptor 4U15
ICL2 113 34.52x52 M3 receptor 4U15 M1 receptor 5CXV
ICL2 114 34.53x53 M3 receptor 4U15 M3 receptor 4U15
ICL2 115 34.54x54 M3 receptor 4U15 M3 receptor 4U15
ICL2 116 34.55x55 M3 receptor 4U15 M3 receptor 4U15
ICL2 117 34.56x56 M3 receptor 4U15 M3 receptor 4U15
ICL2 118 34.57x57 - - - -
TM4 119 4.38x38 A2A receptor 4UHR FFA1 receptor 5TZY
TM4 120 4.39x39 A2A receptor 4UHR PAR1 3VW7
TM4 121 4.40x40 A2A receptor 4UHR μ receptor 6DDE
TM4 122 4.41x41 A2A receptor 4UHR - -
TM4 123 4.42x42 A2A receptor 4UHR A2A receptor 4UHR
TM4 124 4.43x43 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM4 125 4.44x44 A2A receptor 4UHR M4 receptor 5DSG
TM4 126 4.45x45 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM4 127 4.46x46 A2A receptor 4UHR Rhodopsin 5DYS
TM4 128 4.47x47 A2A receptor 4UHR A2A receptor 4UHR
TM4 129 4.48x48 A2A receptor 4UHR - -
TM4 130 4.49x49 A2A receptor 4UHR D4 receptor 5WIV
TM4 131 4.50x50 A2A receptor 4UHR A2A receptor 4UHR
TM4 132 4.51x51 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM4 133 4.52x52 A2A receptor 4UHR - -
TM4 134 4.53x53 A2A receptor 4UHR PAR1 3VW7
TM4 135 4.54x54 A2A receptor 4UHR PAR2 5NDD
TM4 136 4.55x55 A2A receptor 4UHR D2 receptor 6CM4
TM4 137 4.56x56 A2A receptor 4UHR - -
TM4 138 4.57x57 A2A receptor 4UHR - -
TM4 139 4.58x58 A2A receptor 4UHR M3 receptor 4U15
TM4 140 4.59x59 A2A receptor 4UHR D4 receptor 5WIV
TM4 141 4.60x60 A2A receptor 4UHR M3 receptor 4U15
TM4 142 4.61x61 A2A receptor 4UHR PAR1 3VW7
TM4 143 4.62x62 A2A receptor 4UHR OX2 receptor 5WS3
ECL2 144 - - - -
ECL2 145 OX2 receptor 5WQC - -
ECL2 146 OX2 receptor 5WQC - -
ECL2 147 OX2 receptor 5WQC - -
ECL2 148 OX2 receptor 5WQC - -
ECL2 149 OX2 receptor 5WQC OX2 receptor 5WQC
ECL2 150 OX2 receptor 5WQC - -
ECL2 151 - - - -
ECL2 152 - - - -
ECL2 153 - - - -
ECL2 154 OX2 receptor 5WQC - -
ECL2 155 OX2 receptor 5WQC - -
ECL2 156 OX2 receptor 5WQC - -
ECL2 157 OX2 receptor 5WQC OX2 receptor 5WQC
ECL2 158 - - - -
ECL2 159 45.50x50 A2A receptor 4UHR A2A receptor 4UHR
ECL2 160 45.51x51 A2A receptor 4UHR D3 receptor 3PBL
ECL2 161 45.52x52 A2A receptor 4UHR - -
ECL2 162 - - - -
ECL2 163 μ receptor 6DDF - -
ECL2 164 μ receptor 6DDF - -
ECL2 165 μ receptor 6DDF - -
ECL2 166 μ receptor 6DDF - -
ECL2 167 μ receptor 6DDF - -
ECL2 168 - - - -
TM5 169 5.35x35 OX2 receptor 5WS3 - -
TM5 170 5.36x36 A2A receptor 4UHR - -
TM5 171 5.37x37 A2A receptor 4UHR apelin receptor 5VBL
TM5 172 5.38x38 A2A receptor 4UHR κ receptor 4DJH
TM5 173 5.39x39 A2A receptor 4UHR δ receptor 4N6H
TM5 174 5.40x40 A2A receptor 4UHR apelin receptor 5VBL
TM5 175 5.41x41 D2 receptor 6CM4 PAR1 3VW7
TM5 176 5.42x42 D2 receptor 6CM4 A2A receptor 4UHR
TM5 177 5.43x43 A2A receptor 4UHR CXCR4 3ODU
TM5 178 5.44x44 A2A receptor 4UHR PAR1 3VW7
TM5 179 5.45x45 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM5 180 5.46x46 PAR1 3VW7 PAF receptor 5ZKQ
TM5 181 5.47x47 PAR1 3VW7 PAR1 3VW7
TM5 182 5.48x48 A2A receptor 4UHR A2A receptor 4UHR
TM5 183 5.49x49 A2A receptor 4UHR PAF receptor 5ZKQ
TM5 184 5.50x50 A2A receptor 4UHR - -
TM5 185 5.51x51 A2A receptor 4UHR PAF receptor 5ZKQ
TM5 186 5.52x52 A2A receptor 4UHR P2Y1 receptor 4XNW
TM5 187 5.53x53 A2A receptor 4UHR NTS1 receptor 4XES
TM5 188 5.54x54 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM5 189 5.55x55 A2A receptor 4UHR M1 receptor 5CXV
TM5 190 5.56x56 A2A receptor 4UHR - -
TM5 191 5.57x57 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM5 192 5.58x58 A2A receptor 4UHR A2A receptor 4UHR
TM5 193 5.59x59 A2A receptor 4UHR A2A receptor 4UHR
TM5 194 5.60x60 A2A receptor 4UHR H1 receptor 3RZE
TM5 195 5.61x61 A2A receptor 4UHR A1 receptor 5UEN
TM5 196 5.62x62 A2A receptor 4UHR FFA1 receptor 5TZY
TM5 197 5.63x63 A2A receptor 4UHR P2Y12 receptor 4NTJ
TM5 198 5.64x64 A2A receptor 4UHR D2 receptor 6CM4
TM5 199 5.65x65 A2A receptor 4UHR A2A receptor 4UHR
TM5 200 5.66x66 A2A receptor 4UHR A2A receptor 4UHR
TM5 201 5.67x67 A2A receptor 4UHR - -
TM5 202 5.68x68 A2A receptor 4UHR CB1 receptor 5XRA
TM5 203 5.69x69 A2A receptor 4UHR - -
TM5 204 5.70x70 A2A receptor 4UHR A2A receptor 4UHR
TM5 205 5.71x71 A2A receptor 4UHR P2Y12 receptor 4NTJ
TM5 206 5.72x72 A2A receptor 4UHR β2-adrenoceptor 3SN6
TM5 207 5.73x73 A2A receptor 4UHR β2-adrenoceptor 3SN6
TM5 208 5.74x74 A2A receptor 4UHR - -
TM5 209 5.75x75 β2-adrenoceptor 3SN6 - -
TM5 210 5.76x76 β2-adrenoceptor 3SN6 - -
ICL3 211 - - - -
ICL3 212 - - - -
ICL3 213 - - - -
ICL3 214 - - - -
ICL3 215 - - - -
ICL3 225 - - - -
ICL3 226 - - - -
ICL3 227 - - - -
ICL3 228 - - - -
ICL3 229 - - - -
TM6 230 6.24x24 A2A receptor 4UHR - -
TM6 231 6.25x25 A2A receptor 4UHR μ receptor 6DDE
TM6 232 6.26x26 A2A receptor 4UHR OX2 receptor 5WS3
TM6 233 6.27x27 A2A receptor 4UHR - -
TM6 234 6.28x28 A2A receptor 4UHR μ receptor 6DDE
TM6 235 6.29x29 A2A receptor 4UHR 5-HT1B receptor 5V54
TM6 236 6.30x30 A2A receptor 4UHR FFA1 receptor 5TZY
TM6 237 6.31x31 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM6 238 6.32x32 A2A receptor 4UHR μ receptor 6DDE
TM6 239 6.33x33 A2A receptor 4UHR A2A receptor 4UHR
TM6 240 6.34x34 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM6 241 6.35x35 A2A receptor 4UHR A2A receptor 4UHR
TM6 242 6.36x36 A2A receptor 4UHR PAR2 5NDD
TM6 243 6.37x37 A2A receptor 4UHR M2 receptor 3UON
TM6 244 6.38x38 A2A receptor 4UHR PAR1 3VW7
TM6 245 6.39x39 A2A receptor 4UHR CCR5 5UIW
TM6 246 6.40x40 A2A receptor 4UHR - -
TM6 247 6.41x41 A2A receptor 4UHR P2Y12 receptor 4NTJ
TM6 248 6.42x42 A2A receptor 4UHR A2A receptor 4UHR
TM6 249 6.43x43 A2A receptor 4UHR P2Y1 receptor 4XNW
TM6 250 6.44x44 A2A receptor 4UHR A2A receptor 4UHR
TM6 251 6.45x45 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM6 252 6.46x46 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM6 253 6.47x47 A2A receptor 4UHR A2A receptor 4UHR
TM6 254 6.48x48 A2A receptor 4UHR PAR1 3VW7
TM6 255 6.49x49 A2A receptor 4UHR M2 receptor 3UON
TM6 256 6.50x50 A2A receptor 4UHR A2A receptor 4UHR
TM6 257 6.51x51 A2A receptor 4UHR NTS1 receptor 4XES
TM6 258 6.52x52 A2A receptor 4UHR - -
TM6 259 6.53x53 A2A receptor 4UHR A2A receptor 4UHR
TM6 260 6.54x54 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM6 261 6.55x55 A2A receptor 4UHR NTS1 receptor 4XES
TM6 262 6.56x56 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM6 263 6.57x57 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM6 264 6.58x58 A2A receptor 4UHR κ receptor 4DJH
TM6 265 6.59x59 A2A receptor 4UHR P2Y1 receptor 4XNW
TM6 266 6.60x60 A2A receptor 4UHR A2A receptor 4UHR
TM6 267 6.61x61 A2A receptor 4UHR - -
ECL3 268 - - - -
ECL3 269 D2 receptor 6CM4 - -
ECL3 270 D2 receptor 6CM4 - -
ECL3 271 - - - -
TM7 272 7.31x30 A2A receptor 4UHR Rhodopsin 5DYS
TM7 273 7.32x31 A2A receptor 4UHR A1 receptor 5UEN
TM7 274 7.33x32 A2A receptor 4UHR H1 receptor 3RZE
TM7 275 7.34x33 A2A receptor 4UHR FFA1 receptor 5TZY
TM7 276 7.35x34 A2A receptor 4UHR - -
TM7 277 7.36x35 A2A receptor 4UHR - -
TM7 278 7.37x36 A2A receptor 4UHR A2A receptor 4UHR
TM7 279 7.38x37 A2A receptor 4UHR OX2 receptor 5WS3
TM7 280 7.39x38 A2A receptor 4UHR FFA1 receptor 5KW2
TM7 281 7.40x39 A2A receptor 4UHR PAR1 3VW7
TM7 282 7.41x40 A2A receptor 4UHR A2A receptor 4UHR
TM7 283 7.42x41 A2A receptor 4UHR NTS1 receptor 4GRV
TM7 284 7.43x42 A2A receptor 4UHR 5-HT1B receptor 4IAQ
TM7 285 7.44x43 A2A receptor 4UHR Rhodopsin 4ZWJ
TM7 286 7.45x45 A2A receptor 4UHR - -
TM7 287 7.46x46 A2A receptor 4UHR P2Y12 receptor 4NTJ
TM7 288 7.47x47 A2A receptor 4UHR NTS1 receptor 4XES
TM7 289 7.48x48 A2A receptor 4UHR - -
TM7 290 7.49x49 A2A receptor 4UHR - -
TM7 291 7.50x50 A2A receptor 4UHR A2A receptor 4UHR
TM7 292 7.51x51 A2A receptor 4UHR A2A receptor 4UHR
TM7 293 7.52x52 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM7 294 7.53x53 A2A receptor 4UHR A2A receptor 4UHR
TM7 295 7.54x54 A2A receptor 4UHR LPA1 receptor 4Z35
TM7 296 7.55x55 A2A receptor 4UHR 5-HT2B receptor 4IB4
TM7 297 7.56x56 A2A receptor 4UHR PAF receptor 5ZKQ
H8 298 8.47x47 A2A receptor 4UHR - -
H8 299 8.48x48 A2A receptor 4UHR PAR2 5NDD
H8 300 8.49x49 A2A receptor 4UHR Rhodopsin 5DYS
H8 301 8.50x50 A2A receptor 4UHR 5-HT2C receptor 6BQH
H8 302 8.51x51 A2A receptor 4UHR A2A receptor 4UHR
H8 303 8.52x52 A2A receptor 4UHR M2 receptor 3UON
H8 304 8.53x53 A2A receptor 4UHR P2Y12 receptor 4NTJ
H8 305 8.54x54 A2A receptor 4UHR apelin receptor 5VBL
H8 306 8.55x55 A2A receptor 4UHR PAR2 5NDD
H8 307 8.56x56 A2A receptor 4UHR β2-adrenoceptor 3SN6
H8 308 8.57x57 A2A receptor 4UHR A2A receptor 4UHR
H8 309 8.58x58 A2A receptor 4UHR PAR2 5NDD
H8 310 8.59x59 A2A receptor 4UHR A1 receptor 5UEN
C-term 311 A2A receptor 4UHR A2A receptor 4UHR
C-term 312 A2A receptor 4UHR A2A receptor 4UHR
C-term 313 A2A receptor 4UHR A2A receptor 4UHR
C-term 314 A2A receptor 4UHR A2A receptor 4UHR
C-term 315 A2A receptor 4UHR A2A receptor 4UHR
C-term 316 A2A receptor 4UHR A2A receptor 4UHR