ADGRV1 homology model

PROTEIN CLASS

Class B2 (Adhesion)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 5.14 docs)

VERSION

2018-07-10

MAIN TEMPLATE

GLP-1 receptor (sequence similarity: 27%) PDB: 5NX2

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 76.0 4.5 19.4
Side-chains 12.8 10.4 76.7

Number of backbone templates: 3
Number of rotamer templates: 7

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5UZ7
5NX2
4Z9G
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 5890 - - - -
N-term 5891 - - - -
N-term 5892 - - - -
N-term 5893 - - - -
N-term 5894 - - - -
TM1 5895 1.27x27 CT receptor 5UZ7 - -
TM1 5896 1.28x28 CT receptor 5UZ7 - -
TM1 5897 1.29x29 CT receptor 5UZ7 - -
TM1 5898 1.30x30 CT receptor 5UZ7 - -
TM1 5899 1.31x31 CT receptor 5UZ7 - -
TM1 5900 1.32x32 CT receptor 5UZ7 - -
TM1 5901 1.33x33 GLP-1 receptor 5NX2 - -
TM1 5902 1.34x34 GLP-1 receptor 5NX2 - -
TM1 5903 1.35x35 GLP-1 receptor 5NX2 - -
TM1 5904 1.36x36 GLP-1 receptor 5NX2 - -
TM1 5905 1.37x37 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM1 5906 1.38x38 GLP-1 receptor 5NX2 - -
TM1 5907 1.39x39 GLP-1 receptor 5NX2 - -
TM1 5908 1.40x40 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 5909 1.41x41 GLP-1 receptor 5NX2 - -
TM1 5910 1.42x42 GLP-1 receptor 5NX2 - -
TM1 5911 1.43x43 GLP-1 receptor 5NX2 - -
TM1 5912 1.44x44 GLP-1 receptor 5NX2 - -
TM1 5913 1.45x45 GLP-1 receptor 5NX2 - -
TM1 5914 1.46x46 GLP-1 receptor 5NX2 - -
TM1 5915 1.47x47 GLP-1 receptor 5NX2 - -
TM1 5916 1.48x48 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 5917 1.49x49 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 5918 1.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 5919 1.51x51 GLP-1 receptor 5NX2 - -
TM1 5920 1.52x52 GLP-1 receptor 5NX2 - -
TM1 5921 1.53x53 GLP-1 receptor 5NX2 - -
TM1 5922 1.54x54 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 5923 1.55x55 GLP-1 receptor 5NX2 - -
TM1 5924 1.56x56 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 5925 1.57x57 GLP-1 receptor 5NX2 - -
TM1 5926 1.58x58 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 5927 1.59x59 GLP-1 receptor 5NX2 - -
TM1 5928 1.60x60 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM1 5929 1.61x61 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM1 5930 1.62x62 GLP-1 receptor 5NX2 - -
TM1 5931 1.63x63 GLP-1 receptor 5NX2 - -
TM1 5932 1.64x64 GLP-1 receptor 5NX2 - -
ICL1 5933 - - - -
ICL1 5934 - - - -
TM2 5935 2.44x44 GLP-1 receptor 5NX2 - -
TM2 5936 2.45x45 GLP-1 receptor 5NX2 - -
TM2 5937 2.46x46 GLP-1 receptor 5NX2 glucagon receptor 5EE7
TM2 5938 2.47x47 GLP-1 receptor 5NX2 - -
TM2 5939 2.48x48 GLP-1 receptor 5NX2 - -
TM2 5940 2.49x49 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM2 5941 2.50x50 GLP-1 receptor 5NX2 - -
TM2 5942 2.51x51 GLP-1 receptor 5NX2 - -
TM2 5943 2.52x52 GLP-1 receptor 5NX2 - -
TM2 5944 2.53x53 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM2 5945 2.54x54 GLP-1 receptor 5NX2 - -
TM2 5946 2.55x55 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM2 5947 2.56x56 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM2 5948 2.57x57 GLP-1 receptor 5NX2 - -
TM2 5949 2.58x58 GLP-1 receptor 5NX2 - -
TM2 5950 2.59x59 GLP-1 receptor 5NX2 - -
TM2 5951 2.60x60 GLP-1 receptor 5NX2 - -
TM2 5952 2.61x61 GLP-1 receptor 5NX2 - -
TM2 5953 2.62x62 GLP-1 receptor 5NX2 - -
TM2 5954 2.63x63 GLP-1 receptor 5NX2 - -
TM2 5955 2.64x64 GLP-1 receptor 5NX2 - -
TM2 5956 2.65x65 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM2 5957 2.66x66 GLP-1 receptor 5NX2 - -
TM2 5958 2.67x67 GLP-1 receptor 5NX2 - -
TM2 5959 2.68x68 GLP-1 receptor 5NX2 - -
TM2 5960 2.69x69 GLP-1 receptor 5NX2 - -
TM2 5961 2.70x70 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ECL1 5962 - - - -
ECL1 5963 - - - -
ECL1 5964 - - - -
ECL1 5965 - - - -
ECL1 5966 - - - -
ECL1 5967 - - - -
TM3 5968 3.27x27 GLP-1 receptor 5NX2 - -
TM3 5969 3.28x28 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5970 3.29x29 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5971 3.30x30 GLP-1 receptor 5NX2 - -
TM3 5972 3.31x31 GLP-1 receptor 5NX2 - -
TM3 5973 3.32x32 GLP-1 receptor 5NX2 - -
TM3 5974 3.33x33 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM3 5975 3.34x34 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM3 5976 3.35x35 GLP-1 receptor 5NX2 - -
TM3 5977 3.36x36 GLP-1 receptor 5NX2 - -
TM3 5978 3.37x37 GLP-1 receptor 5NX2 - -
TM3 5979 3.38x38 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5980 3.39x39 GLP-1 receptor 5NX2 - -
TM3 5981 3.40x40 GLP-1 receptor 5NX2 - -
TM3 5982 3.41x41 GLP-1 receptor 5NX2 - -
TM3 5983 3.42x42 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM3 5984 3.43x43 GLP-1 receptor 5NX2 - -
TM3 5985 3.44x44 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM3 5986 3.45x45 GLP-1 receptor 5NX2 - -
TM3 5987 3.46x46 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5988 3.47x47 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM3 5989 3.48x48 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5990 3.49x49 GLP-1 receptor 5NX2 - -
TM3 5991 3.50x50 GLP-1 receptor 5NX2 - -
TM3 5992 3.51x51 GLP-1 receptor 5NX2 - -
TM3 5993 3.52x52 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 5994 3.53x53 GLP-1 receptor 5NX2 - -
TM3 5995 3.54x54 GLP-1 receptor 5NX2 - -
TM3 5996 3.55x55 GLP-1 receptor 5NX2 - -
TM3 5997 3.56x56 GLP-1 receptor 5NX2 - -
TM3 5998 3.57x57 GLP-1 receptor 5NX2 - -
TM3 5999 3.58x58 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM3 6000 3.59x59 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM3 6001 3.60x60 GLP-1 receptor 5NX2 - -
ICL2 6002 - - - -
ICL2 6003 - - - -
ICL2 6004 - - - -
ICL2 6005 - - - -
ICL2 6006 - - - -
ICL2 6007 - - - -
TM4 6008 4.40x41 GLP-1 receptor 5NX2 - -
TM4 6009 4.41x42 GLP-1 receptor 5NX2 - -
TM4 6010 4.42x43 GLP-1 receptor 5NX2 - -
TM4 6011 4.43x44 GLP-1 receptor 5NX2 - -
TM4 6012 4.44x45 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 6013 4.45x46 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM4 6014 4.46x47 GLP-1 receptor 5NX2 - -
TM4 6015 4.47x48 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM4 6016 4.48x49 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM4 6017 4.49x491 GLP-1 receptor 5NX2 - -
TM4 6018 4.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 6019 4.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 6020 4.52x52 GLP-1 receptor 5NX2 - -
TM4 6021 4.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 6022 4.54x54 GLP-1 receptor 5NX2 glucagon receptor 5EE7
TM4 6023 4.55x55 GLP-1 receptor 5NX2 - -
TM4 6024 4.56x56 GLP-1 receptor 5NX2 - -
TM4 6025 4.57x57 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM4 6026 4.58x58 GLP-1 receptor 5NX2 GLP-1 receptor 5VAI
TM4 6027 4.59x59 GLP-1 receptor 5NX2 - -
TM4 6028 4.60x60 GLP-1 receptor 5NX2 - -
TM4 6029 4.61x61 GLP-1 receptor 5NX2 - -
TM4 6030 4.62x62 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM4 6031 4.63x63 GLP-1 receptor 5NX2 - -
TM4 6032 4.64x64 GLP-1 receptor 5NX2 - -
TM4 6033 4.65x65 GLP-1 receptor 5NX2 - -
TM4 6034 4.66x66 GLP-1 receptor 5NX2 - -
TM4 6035 4.67x67 GLP-1 receptor 5NX2 - -
TM4 6036 4.68x68 CRF1 receptor 4Z9G - -
ECL2 6037 - - - -
ECL2 6038 - - - -
ECL2 6039 - - - -
ECL2 6040 - - - -
ECL2 6041 - - - -
ECL2 6042 - - - -
ECL2 6043 - - - -
ECL2 6044 - - - -
ECL2 6045 - - - -
ECL2 6046 - - - -
ECL2 6047 - - - -
ECL2 6048 - - - -
ECL2 6049 - - - -
ECL2 6050 - - - -
ECL2 6051 - - - -
ECL2 6052 45.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
ECL2 6053 45.51x51 GLP-1 receptor 5NX2 - -
ECL2 6054 45.52x52 GLP-1 receptor 5NX2 - -
ECL2 6055 - - - -
ECL2 6056 - - - -
ECL2 6057 - - - -
TM5 6058 5.32x32 - - - -
TM5 6059 5.33x33 GLP-1 receptor 5NX2 - -
TM5 6060 5.34x34 GLP-1 receptor 5NX2 - -
TM5 6061 5.35x35 GLP-1 receptor 5NX2 - -
TM5 6062 5.36x36 GLP-1 receptor 5NX2 glucagon receptor 5YQZ
TM5 6063 5.37x37 GLP-1 receptor 5NX2 - -
TM5 6064 5.38x38 GLP-1 receptor 5NX2 - -
TM5 6065 5.39x39 GLP-1 receptor 5NX2 - -
TM5 6066 5.40x40 GLP-1 receptor 5NX2 - -
TM5 6067 5.41x41 GLP-1 receptor 5NX2 - -
TM5 6068 5.42x42 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 6069 5.43x43 GLP-1 receptor 5NX2 - -
TM5 6070 5.44x44 GLP-1 receptor 5NX2 - -
TM5 6071 5.45x45 GLP-1 receptor 5NX2 - -
TM5 6072 5.46x46 GLP-1 receptor 5NX2 - -
TM5 6073 5.47x47 GLP-1 receptor 5NX2 - -
TM5 6074 5.48x48 GLP-1 receptor 5NX2 CT receptor 5UZ7
TM5 6075 5.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 6076 5.50x50 GLP-1 receptor 5NX2 - -
TM5 6077 5.51x51 GLP-1 receptor 5NX2 - -
TM5 6078 5.52x52 GLP-1 receptor 5NX2 - -
TM5 6079 5.53x53 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM5 6080 5.54x54 GLP-1 receptor 5NX2 - -
TM5 6081 5.55x55 GLP-1 receptor 5NX2 - -
TM5 6082 5.56x56 GLP-1 receptor 5NX2 - -
TM5 6083 5.57x57 GLP-1 receptor 5NX2 - -
TM5 6084 5.58x58 GLP-1 receptor 5NX2 - -
TM5 6085 5.59x59 GLP-1 receptor 5NX2 - -
TM5 6086 5.60x60 GLP-1 receptor 5NX2 - -
TM5 6087 5.61x61 GLP-1 receptor 5NX2 - -
TM5 6088 5.62x62 GLP-1 receptor 5NX2 - -
TM5 6089 5.63x63 GLP-1 receptor 5NX2 - -
TM5 6090 5.64x64 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM5 6091 5.65x65 GLP-1 receptor 5NX2 - -
ICL3 6092 - - - -
ICL3 6093 - - - -
ICL3 6094 - - - -
ICL3 6095 - - - -
ICL3 6096 - - - -
ICL3 6097 - - - -
ICL3 6098 - - - -
ICL3 6099 - - - -
TM6 6100 6.34x34 GLP-1 receptor 5NX2 - -
TM6 6101 6.35x35 GLP-1 receptor 5NX2 - -
TM6 6102 6.36x36 GLP-1 receptor 5NX2 - -
TM6 6103 6.37x37 GLP-1 receptor 5NX2 - -
TM6 6104 6.38x38 GLP-1 receptor 5NX2 - -
TM6 6105 6.39x39 GLP-1 receptor 5NX2 - -
TM6 6106 6.40x40 GLP-1 receptor 5NX2 - -
TM6 6107 6.41x41 GLP-1 receptor 5NX2 - -
TM6 6108 6.42x42 GLP-1 receptor 5NX2 - -
TM6 6109 6.43x43 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 6110 6.44x44 GLP-1 receptor 5NX2 - -
TM6 6111 6.45x45 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 6112 6.46x46 GLP-1 receptor 5NX2 - -
TM6 6113 6.47x47 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 6114 6.48x48 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM6 6115 6.49x49 GLP-1 receptor 5NX2 - -
TM6 6116 6.50x50 GLP-1 receptor 5NX2 - -
TM6 6117 6.51x51 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
TM6 6118 6.52x52 GLP-1 receptor 5NX2 CRF1 receptor 4Z9G
TM6 6119 6.53x53 GLP-1 receptor 5NX2 - -
TM6 6120 6.54x54 GLP-1 receptor 5NX2 - -
TM6 6121 6.55x55 GLP-1 receptor 5NX2 - -
TM6 6122 6.56x56 GLP-1 receptor 5NX2 - -
TM6 6123 6.57x57 GLP-1 receptor 5NX2 - -
TM6 6124 6.58x58 GLP-1 receptor 5NX2 - -
ECL3 6125 - - - -
ECL3 6126 - - - -
ECL3 6127 - - - -
ECL3 6128 - - - -
ECL3 6129 - - - -
TM7 6130 7.35x34 GLP-1 receptor 5NX2 - -
TM7 6131 7.36x35 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6132 7.37x36 GLP-1 receptor 5NX2 - -
TM7 6133 7.38x37 GLP-1 receptor 5NX2 - -
TM7 6134 7.39x38 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6135 7.40x39 GLP-1 receptor 5NX2 - -
TM7 6136 7.41x40 GLP-1 receptor 5NX2 - -
TM7 6137 7.42x41 GLP-1 receptor 5NX2 - -
TM7 6138 7.43x42 GLP-1 receptor 5NX2 - -
TM7 6139 7.44x43 GLP-1 receptor 5NX2 - -
TM7 6140 7.45x44 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6141 7.46x45 GLP-1 receptor 5NX2 - -
TM7 6142 7.47x46 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6143 7.48x47 GLP-1 receptor 5NX2 - -
TM7 6144 7.49x49 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6145 7.50x50 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6146 7.51x51 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6147 7.52x52 GLP-1 receptor 5NX2 - -
TM7 6148 7.53x53 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6149 7.54x54 GLP-1 receptor 5NX2 - -
TM7 6150 7.55x55 GLP-1 receptor 5NX2 - -
TM7 6151 7.56x56 GLP-1 receptor 5NX2 - -
TM7 6152 7.57x57 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
TM7 6153 7.58x58 GLP-1 receptor 5NX2 - -
TM7 6154 7.59x59 GLP-1 receptor 5NX2 - -
TM7 6155 7.60x60 GLP-1 receptor 5NX2 glucagon receptor 5XEZ
H8 6156 8.47x47 GLP-1 receptor 5NX2 - -
H8 6157 8.48x48 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 6158 8.49x49 GLP-1 receptor 5NX2 - -
H8 6159 8.50x50 GLP-1 receptor 5NX2 - -
H8 6160 8.51x51 GLP-1 receptor 5NX2 - -
H8 6161 8.52x52 GLP-1 receptor 5NX2 - -
H8 6162 8.53x53 GLP-1 receptor 5NX2 - -
H8 6163 8.54x54 GLP-1 receptor 5NX2 - -
H8 6164 8.55x55 GLP-1 receptor 5NX2 CT receptor 5UZ7
H8 6165 8.56x56 GLP-1 receptor 5NX2 - -
H8 6166 8.57x57 GLP-1 receptor 5NX2 GLP-1 receptor 5NX2
H8 6167 8.58x58 CT receptor 5UZ7 - -
H8 6168 8.59x59 CT receptor 5UZ7 - -
H8 6169 8.60x60 CT receptor 5UZ7 - -
H8 6170 8.61x61 CT receptor 5UZ7 - -
H8 6171 8.62x62 CT receptor 5UZ7 - -
H8 6172 8.63x63 CT receptor 5UZ7 - -
C-term 6173 - - - -
C-term 6174 - - - -
C-term 6175 - - - -
C-term 6176 - - - -
C-term 6177 - - - -