BLT1 receptor homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 7.21 docs)

VERSION

2018-07-10

MAIN TEMPLATE

μ receptor (sequence similarity: 44%) PDB: 6DDE

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 74.5 17.1 8.4
Side-chains 19.5 61.1 19.5

Number of backbone templates: 6
Number of rotamer templates: 30

NGL is a WebGL based 3D viewer powered by MMTF.

5X33
6DDE
4ZUD
5UNF
4XNW
5VBL
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 11 - - - -
N-term 12 - - - -
N-term 13 - - - -
N-term 14 - - - -
N-term 15 - - - -
TM1 16 1.30x30 BLT1 receptor 5X33 BLT1 receptor 5X33
TM1 17 1.31x31 μ receptor 6DDE BLT1 receptor 5X33
TM1 18 1.32x32 μ receptor 6DDE A2A receptor 5WF5
TM1 19 1.33x33 μ receptor 6DDE 5-HT2B receptor 4IB4
TM1 20 1.34x34 μ receptor 6DDE NTS1 receptor 4XES
TM1 21 1.35x35 μ receptor 6DDE BLT1 receptor 5X33
TM1 22 1.36x36 μ receptor 6DDE A2A receptor 4UHR
TM1 23 1.37x37 μ receptor 6DDE PAR2 5NDD
TM1 24 1.38x38 μ receptor 6DDE 5-HT2B receptor 4IB4
TM1 25 1.39x39 μ receptor 6DDE 5-HT2B receptor 4IB4
TM1 26 1.40x40 μ receptor 6DDE μ receptor 6DDE
TM1 27 1.41x41 μ receptor 6DDE P2Y12 receptor 4NTJ
TM1 28 1.42x42 μ receptor 6DDE FFA1 receptor 5TZY
TM1 29 1.43x43 μ receptor 6DDE - -
TM1 30 1.44x44 μ receptor 6DDE FFA1 receptor 5TZY
TM1 31 1.45x45 μ receptor 6DDE μ receptor 6DDE
TM1 32 1.46x46 μ receptor 6DDE μ receptor 6DDE
TM1 33 1.47x47 μ receptor 6DDE PAR1 3VW7
TM1 34 1.48x48 μ receptor 6DDE PAR1 3VW7
TM1 35 1.49x49 μ receptor 6DDE μ receptor 6DDE
TM1 36 1.50x50 μ receptor 6DDE μ receptor 6DDE
TM1 37 1.51x51 μ receptor 6DDE NTS1 receptor 4XES
TM1 38 1.52x52 μ receptor 6DDE 5-HT1B receptor 4IAQ
TM1 39 1.53x53 μ receptor 6DDE μ receptor 6DDE
TM1 40 1.54x54 μ receptor 6DDE BLT1 receptor 5X33
TM1 41 1.55x55 μ receptor 6DDE P2Y1 receptor 4XNW
TM1 42 1.56x56 μ receptor 6DDE BLT1 receptor 5X33
TM1 43 1.57x57 μ receptor 6DDE BLT1 receptor 5X33
TM1 44 1.58x58 μ receptor 6DDE PAR2 5NDD
TM1 45 1.59x59 μ receptor 6DDE OX2 receptor 5WS3
TM1 46 1.60x60 μ receptor 6DDE PAR2 5NDD
ICL1 47 12.48x48 - - - -
ICL1 48 12.49x49 AT1 receptor 4ZUD M4 receptor 5DSG
ICL1 49 12.50x50 AT1 receptor 4ZUD - -
ICL1 50 12.51x51 - - - -
TM2 51 2.37x37 BLT1 receptor 5X33 BLT1 receptor 5X33
TM2 52 2.38x38 μ receptor 6DDE A2A receptor 4UHR
TM2 53 2.39x39 μ receptor 6DDE μ receptor 6DDE
TM2 54 2.40x40 μ receptor 6DDE FFA1 receptor 5TZY
TM2 55 2.41x41 μ receptor 6DDE BLT1 receptor 5X33
TM2 56 2.42x42 μ receptor 6DDE BLT1 receptor 5X33
TM2 57 2.43x43 μ receptor 6DDE A2A receptor 4UHR
TM2 58 2.44x44 μ receptor 6DDE PAR1 3VW7
TM2 59 2.45x45 μ receptor 6DDE μ receptor 6DDE
TM2 60 2.46x46 μ receptor 6DDE μ receptor 6DDE
TM2 61 2.47x47 μ receptor 6DDE μ receptor 6DDE
TM2 62 2.48x48 μ receptor 6DDE μ receptor 6DDE
TM2 63 2.49x49 μ receptor 6DDE μ receptor 6DDE
TM2 64 2.50x50 μ receptor 6DDE μ receptor 6DDE
TM2 65 2.51x51 μ receptor 6DDE NTS1 receptor 4XES
TM2 66 2.52x52 μ receptor 6DDE A2A receptor 5WF5
TM2 67 2.53x53 μ receptor 6DDE 5-HT2B receptor 4IB4
TM2 68 2.54x54 μ receptor 6DDE NTS1 receptor 4XES
TM2 69 2.55x55 μ receptor 6DDE NTS1 receptor 4XES
TM2 70 2.56x56 μ receptor 6DDE μ receptor 6DDE
TM2 71 2.57x57 μ receptor 6DDE BLT1 receptor 5X33
TM2 72 2.58x58 μ receptor 6DDE μ receptor 6DDE
TM2 73 2.59x59 μ receptor 6DDE μ receptor 6DDE
TM2 74 2.60x60 μ receptor 6DDE BLT1 receptor 5X33
TM2 75 2.61x61 μ receptor 6DDE NTS1 receptor 4XES
TM2 76 2.62x62 μ receptor 6DDE BLT1 receptor 5X33
TM2 77 2.63x63 μ receptor 6DDE BLT1 receptor 5X33
TM2 78 2.64x64 μ receptor 6DDE BLT1 receptor 5X33
TM2 79 2.65x65 μ receptor 6DDE P2Y12 receptor 4NTJ
TM2 80 2.66x66 μ receptor 6DDE C5a1 receptor 5O9H
ECL1 81 - - - -
ECL1 82 23.49x49 BLT1 receptor 5X33 BLT1 receptor 5X33
ECL1 83 23.50x50 BLT1 receptor 5X33 BLT1 receptor 5X33
ECL1 84 23.51x51 BLT1 receptor 5X33 BLT1 receptor 5X33
ECL1 85 23.52x52 - - - -
TM3 86 3.21x21 μ receptor 6DDE μ receptor 6DDE
TM3 87 3.22x22 μ receptor 6DDE 5-HT2B receptor 4IB4
TM3 88 3.23x23 μ receptor 6DDE NTS1 receptor 4XES
TM3 89 3.24x24 μ receptor 6DDE NTS1 receptor 4XES
TM3 90 3.25x25 μ receptor 6DDE μ receptor 6DDE
TM3 91 3.26x26 μ receptor 6DDE NTS1 receptor 4XES
TM3 92 3.27x27 μ receptor 6DDE P2Y1 receptor 4XNW
TM3 93 3.28x28 μ receptor 6DDE BLT1 receptor 5X33
TM3 94 3.29x29 μ receptor 6DDE BLT1 receptor 5X33
TM3 95 3.30x30 μ receptor 6DDE BLT1 receptor 5X33
TM3 96 3.31x31 μ receptor 6DDE Y1 receptor 5ZBH
TM3 97 3.32x32 μ receptor 6DDE BLT1 receptor 5X33
TM3 98 3.33x33 μ receptor 6DDE BLT1 receptor 5X33
TM3 99 3.34x34 μ receptor 6DDE P2Y1 receptor 4XNW
TM3 100 3.35x35 μ receptor 6DDE BLT1 receptor 5X33
TM3 101 3.36x36 μ receptor 6DDE μ receptor 6DDE
TM3 102 3.37x37 μ receptor 6DDE NTS1 receptor 4XES
TM3 103 3.38x38 μ receptor 6DDE NTS1 receptor 4XES
TM3 104 3.39x39 μ receptor 6DDE μ receptor 6DDE
TM3 105 3.40x40 μ receptor 6DDE PAF receptor 5ZKQ
TM3 106 3.41x41 μ receptor 6DDE NTS1 receptor 4XES
TM3 107 3.42x42 μ receptor 6DDE PAR1 3VW7
TM3 108 3.43x43 μ receptor 6DDE BLT1 receptor 5X33
TM3 109 3.44x44 μ receptor 6DDE P2Y1 receptor 4XNW
TM3 110 3.45x45 μ receptor 6DDE 5-HT2B receptor 4IB4
TM3 111 3.46x46 μ receptor 6DDE μ receptor 6DDE
TM3 112 3.47x47 μ receptor 6DDE μ receptor 6DDE
TM3 113 3.48x48 μ receptor 6DDE 5-HT1B receptor 4IAQ
TM3 114 3.49x49 μ receptor 6DDE μ receptor 6DDE
TM3 115 3.50x50 μ receptor 6DDE μ receptor 6DDE
TM3 116 3.51x51 μ receptor 6DDE BLT1 receptor 5X33
TM3 117 3.52x52 μ receptor 6DDE NTS1 receptor 4XES
TM3 118 3.53x53 μ receptor 6DDE μ receptor 6DDE
TM3 119 3.54x54 μ receptor 6DDE μ receptor 6DDE
TM3 120 3.55x55 μ receptor 6DDE FFA1 receptor 5TZY
TM3 121 3.56x56 μ receptor 6DDE PAF receptor 5ZKQ
ICL2 122 34.50x50 - - - -
ICL2 123 34.51x51 BLT1 receptor 5X33 BLT1 receptor 5X33
ICL2 124 34.52x52 BLT1 receptor 5X33 - -
ICL2 125 34.53x53 BLT1 receptor 5X33 BLT1 receptor 5X33
ICL2 126 34.54x54 BLT1 receptor 5X33 BLT1 receptor 5X33
ICL2 127 34.55x55 BLT1 receptor 5X33 BLT1 receptor 5X33
ICL2 128 34.56x56 BLT1 receptor 5X33 NTS1 receptor 4XES
ICL2 129 34.57x57 - - - -
TM4 130 4.38x38 μ receptor 6DDE μ receptor 6DDE
TM4 131 4.39x39 μ receptor 6DDE P2Y1 receptor 4XNW
TM4 132 4.40x40 μ receptor 6DDE 5-HT2B receptor 4IB4
TM4 133 4.41x41 μ receptor 6DDE M2 receptor 3UON
TM4 134 4.42x42 μ receptor 6DDE μ receptor 6DDE
TM4 135 4.43x43 μ receptor 6DDE BLT1 receptor 5X33
TM4 136 4.44x44 μ receptor 6DDE - -
TM4 137 4.45x45 μ receptor 6DDE μ receptor 6DDE
TM4 138 4.46x46 μ receptor 6DDE BLT1 receptor 5X33
TM4 139 4.47x47 μ receptor 6DDE A2A receptor 4UHR
TM4 140 4.48x48 μ receptor 6DDE BLT1 receptor 5X33
TM4 141 4.49x49 μ receptor 6DDE NTS1 receptor 4XES
TM4 142 4.50x50 μ receptor 6DDE μ receptor 6DDE
TM4 143 4.51x51 μ receptor 6DDE A2A receptor 4UHR
TM4 144 4.52x52 μ receptor 6DDE μ receptor 6DDE
TM4 145 4.53x53 μ receptor 6DDE μ receptor 6DDE
TM4 146 4.54x54 μ receptor 6DDE A2A receptor 4UHR
TM4 147 4.55x55 μ receptor 6DDE NTS1 receptor 4XES
TM4 148 4.56x56 μ receptor 6DDE NTS1 receptor 4XES
TM4 149 4.57x57 BLT1 receptor 5X33 NTS1 receptor 4XES
TM4 150 4.58x59 BLT1 receptor 5X33 A2A receptor 4UHR
TM4 151 4.59x60 μ receptor 6DDE NTS1 receptor 4XES
TM4 152 4.60x61 μ receptor 6DDE 5-HT2B receptor 4IB4
TM4 153 4.61x62 μ receptor 6DDE NTS1 receptor 4XES
TM4 154 4.62x63 BLT1 receptor 5X33 BLT1 receptor 5X33
TM4 155 4.63x64 BLT1 receptor 5X33 C5a1 receptor 5O9H
TM4 156 4.64x65 BLT1 receptor 5X33 BLT1 receptor 5X33
ECL2 157 μ receptor 6DDE - -
ECL2 158 μ receptor 6DDE - -
ECL2 159 μ receptor 6DDE - -
ECL2 160 μ receptor 6DDE - -
ECL2 161 μ receptor 6DDE - -
ECL2 162 μ receptor 6DDE - -
ECL2 163 μ receptor 6DDE - -
ECL2 164 μ receptor 6DDE - -
ECL2 165 μ receptor 6DDE - -
ECL2 166 μ receptor 6DDE - -
ECL2 167 - - - -
ECL2 168 45.50x50 μ receptor 6DDE μ receptor 6DDE
ECL2 169 45.51x51 μ receptor 6DDE Y1 receptor 5ZBH
ECL2 170 45.52x52 μ receptor 6DDE NTS1 receptor 4XES
ECL2 171 - - - -
ECL2 172 AT2 receptor 5UNF AT2 receptor 5UNF
ECL2 173 AT2 receptor 5UNF - -
ECL2 174 AT2 receptor 5UNF AT2 receptor 5UNF
ECL2 175 AT2 receptor 5UNF AT2 receptor 5UNF
ECL2 176 - - - -
TM5 177 5.34x35 μ receptor 6DDE BLT1 receptor 5X33
TM5 178 5.35x36 μ receptor 6DDE Y1 receptor 5ZBH
TM5 179 5.36x37 μ receptor 6DDE BLT1 receptor 5X33
TM5 180 5.37x38 μ receptor 6DDE BLT1 receptor 5X33
TM5 181 5.38x39 μ receptor 6DDE BLT1 receptor 5X33
TM5 182 5.39x40 μ receptor 6DDE BLT1 receptor 5X33
TM5 183 5.40x41 μ receptor 6DDE μ receptor 6DDE
TM5 184 5.41x42 μ receptor 6DDE 5-HT2B receptor 4IB4
TM5 185 5.42x43 μ receptor 6DDE BLT1 receptor 5X33
TM5 186 5.43x44 μ receptor 6DDE PAR1 3VW7
TM5 187 5.44x45 μ receptor 6DDE P2Y1 receptor 4XNW
TM5 188 5.45x46 μ receptor 6DDE BLT1 receptor 5X33
TM5 189 5.46x461 μ receptor 6DDE BLT1 receptor 5X33
TM5 190 5.47x47 μ receptor 6DDE μ receptor 6DDE
TM5 191 5.48x48 μ receptor 6DDE NTS1 receptor 4XES
TM5 192 5.49x49 μ receptor 6DDE PAF receptor 5ZKQ
TM5 193 5.50x50 μ receptor 6DDE μ receptor 6DDE
TM5 194 5.51x51 μ receptor 6DDE PAF receptor 5ZKQ
TM5 195 5.52x52 μ receptor 6DDE NTS1 receptor 4XES
TM5 196 5.53x53 μ receptor 6DDE - -
TM5 197 5.54x54 μ receptor 6DDE P2Y12 receptor 4NTJ
TM5 198 5.55x55 μ receptor 6DDE BLT1 receptor 5X33
TM5 199 5.56x56 μ receptor 6DDE 5-HT1B receptor 4IAQ
TM5 200 5.57x57 μ receptor 6DDE BLT1 receptor 5X33
TM5 201 5.58x58 μ receptor 6DDE μ receptor 6DDE
TM5 202 5.59x59 μ receptor 6DDE CCR5 5UIW
TM5 203 5.60x60 μ receptor 6DDE BLT1 receptor 5X33
TM5 204 5.61x61 μ receptor 6DDE NTS1 receptor 4XES
TM5 205 5.62x62 μ receptor 6DDE - -
TM5 206 5.63x63 μ receptor 6DDE P2Y1 receptor 4XNW
TM5 207 5.64x64 μ receptor 6DDE μ receptor 6DDE
TM5 208 5.65x65 μ receptor 6DDE μ receptor 6DDE
TM5 209 5.66x66 μ receptor 6DDE 5-HT2B receptor 4IB4
TM5 210 5.67x67 μ receptor 6DDE - -
TM5 211 5.68x68 μ receptor 6DDE C5a1 receptor 6C1R
ICL3 212 - - - -
ICL3 213 - - - -
ICL3 214 - - - -
ICL3 215 - - - -
TM6 216 6.30x30 μ receptor 6DDE C5a1 receptor 6C1R
TM6 217 6.31x31 μ receptor 6DDE μ receptor 6DDE
TM6 218 6.32x32 μ receptor 6DDE μ receptor 6DDE
TM6 219 6.33x33 μ receptor 6DDE C5a1 receptor 5O9H
TM6 220 6.34x34 μ receptor 6DDE - -
TM6 221 6.35x35 μ receptor 6DDE μ receptor 6DDE
TM6 222 6.36x36 μ receptor 6DDE κ receptor 4DJH
TM6 223 6.37x37 μ receptor 6DDE μ receptor 6DDE
TM6 224 6.38x38 μ receptor 6DDE P2Y1 receptor 4XNW
TM6 225 6.39x39 μ receptor 6DDE A1 receptor 5UEN
TM6 226 6.40x40 μ receptor 6DDE P2Y1 receptor 4XNW
TM6 227 6.41x41 μ receptor 6DDE P2Y12 receptor 4NTJ
TM6 228 6.42x42 μ receptor 6DDE P2Y1 receptor 4XNW
TM6 229 6.43x43 μ receptor 6DDE P2Y1 receptor 4XNW
TM6 230 6.44x44 μ receptor 6DDE μ receptor 6DDE
TM6 231 6.45x45 μ receptor 6DDE A2A receptor 4UHR
TM6 232 6.46x46 μ receptor 6DDE P2Y1 receptor 4XNW
TM6 233 6.47x47 μ receptor 6DDE BLT1 receptor 5X33
TM6 234 6.48x48 μ receptor 6DDE μ receptor 6DDE
TM6 235 6.49x49 μ receptor 6DDE NTS1 receptor 4XES
TM6 236 6.50x50 μ receptor 6DDE μ receptor 6DDE
TM6 237 6.51x51 μ receptor 6DDE NTS1 receptor 4XES
TM6 238 6.52x52 μ receptor 6DDE μ receptor 6DDE
TM6 239 6.53x53 μ receptor 6DDE NTS1 receptor 4XES
TM6 240 6.54x54 μ receptor 6DDE PAF receptor 5ZKQ
TM6 241 6.55x55 μ receptor 6DDE 5-HT2B receptor 4IB4
TM6 242 6.56x56 μ receptor 6DDE NTS1 receptor 4XES
TM6 243 6.57x57 μ receptor 6DDE PAR1 3VW7
TM6 244 6.58x58 μ receptor 6DDE BLT1 receptor 5X33
TM6 245 6.59x59 μ receptor 6DDE μ receptor 6DDE
TM6 246 6.60x60 μ receptor 6DDE - -
TM6 247 6.61x61 μ receptor 6DDE - -
TM6 248 6.62x62 AT1 receptor 4ZUD CCR9 5LWE
TM6 249 6.63x63 AT1 receptor 4ZUD P2Y1 receptor 4XNW
TM6 250 6.64x64 AT1 receptor 4ZUD CCR9 5LWE
ECL3 251 - - - -
ECL3 252 P2Y1 receptor 4XNW P2Y1 receptor 4XNW
ECL3 253 P2Y1 receptor 4XNW - -
ECL3 254 P2Y1 receptor 4XNW - -
ECL3 255 - - - -
TM7 256 7.24x23 AT1 receptor 4ZUD - -
TM7 257 7.25x24 AT1 receptor 4ZUD - -
TM7 258 7.26x25 AT1 receptor 4ZUD - -
TM7 259 7.27x26 AT1 receptor 4ZUD AT2 receptor 5UNG
TM7 260 7.28x27 AT1 receptor 4ZUD - -
TM7 261 7.29x28 AT1 receptor 4ZUD 5-HT2C receptor 6BQH
TM7 262 7.30x29 μ receptor 6DDE P2Y1 receptor 4XNW
TM7 263 7.31x30 μ receptor 6DDE 5-HT2B receptor 4IB4
TM7 264 7.32x31 μ receptor 6DDE A1 receptor 5UEN
TM7 265 7.33x32 μ receptor 6DDE AT2 receptor 5UNG
TM7 266 7.34x33 μ receptor 6DDE PAR1 3VW7
TM7 267 7.35x34 μ receptor 6DDE FFA1 receptor 5TZY
TM7 268 7.36x35 μ receptor 6DDE 5-HT2C receptor 6BQH
TM7 269 7.37x36 μ receptor 6DDE P2Y1 receptor 4XNW
TM7 270 7.38x37 μ receptor 6DDE β2-adrenoceptor 3SN6
TM7 271 7.39x38 μ receptor 6DDE μ receptor 6DDE
TM7 272 7.40x39 μ receptor 6DDE μ receptor 6DDE
TM7 273 7.41x40 μ receptor 6DDE μ receptor 6DDE
TM7 274 7.42x41 μ receptor 6DDE P2Y1 receptor 4XNW
TM7 275 7.43x42 μ receptor 6DDE BLT1 receptor 5X33
TM7 276 7.44x43 μ receptor 6DDE P2Y1 receptor 4XNW
TM7 277 7.45x45 μ receptor 6DDE NTS1 receptor 4XES
TM7 278 7.46x46 μ receptor 6DDE μ receptor 6DDE
TM7 279 7.47x47 μ receptor 6DDE BLT1 receptor 5X33
TM7 280 7.48x48 μ receptor 6DDE 5-HT2B receptor 4IB4
TM7 281 7.49x49 μ receptor 6DDE μ receptor 6DDE
TM7 282 7.50x50 μ receptor 6DDE μ receptor 6DDE
TM7 283 7.51x51 μ receptor 6DDE μ receptor 6DDE
TM7 284 7.52x52 μ receptor 6DDE μ receptor 6DDE
TM7 285 7.53x53 μ receptor 6DDE μ receptor 6DDE
TM7 286 7.54x54 μ receptor 6DDE μ receptor 6DDE
TM7 287 7.55x55 apelin receptor 5VBL - -
TM7 288 7.56x56 apelin receptor 5VBL C5a1 receptor 5O9H
H8 289 8.47x47 apelin receptor 5VBL apelin receptor 5VBL
H8 290 8.48x48 apelin receptor 5VBL OX2 receptor 5WS3
H8 291 8.49x49 apelin receptor 5VBL apelin receptor 5VBL
H8 292 8.50x50 apelin receptor 5VBL CB1 receptor 5XRA
H8 293 8.51x51 apelin receptor 5VBL - -
H8 294 8.52x52 apelin receptor 5VBL κ receptor 4DJH
H8 295 8.53x53 apelin receptor 5VBL P2Y12 receptor 4NTJ
H8 296 8.54x54 apelin receptor 5VBL PAR2 5NDD
H8 297 8.55x55 apelin receptor 5VBL 5-HT2B receptor 4IB4
H8 298 8.56x56 apelin receptor 5VBL CCR5 4MBS
H8 299 8.57x57 apelin receptor 5VBL - -
H8 300 8.58x58 apelin receptor 5VBL CCR5 5UIW
H8 301 8.59x59 apelin receptor 5VBL - -
H8 302 8.60x60 apelin receptor 5VBL - -
H8 303 8.61x61 apelin receptor 5VBL - -
C-term 304 - - - -
C-term 305 - - - -
C-term 306 - - - -
C-term 307 - - - -
C-term 308 - - - -