MAS1L homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Active (Δ distance (Å): 9.79 docs)

VERSION

2018-07-10

MAIN TEMPLATE

A2A receptor (sequence similarity: 32%) PDB: 5G53

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 78.9 12.9 8.2
Side-chains 16.8 50.5 32.6

Number of backbone templates: 6
Number of rotamer templates: 35

NGL is a WebGL based 3D viewer powered by MMTF.

5LWE
5G53
4UHR
4PXZ
5O9H
3VW7
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 65 CCR9 5LWE CCR9 5LWE
N-term 66 CCR9 5LWE CCR9 5LWE
N-term 67 CCR9 5LWE CCR9 5LWE
N-term 68 CCR9 5LWE CCR9 5LWE
N-term 69 CCR9 5LWE CCR9 5LWE
TM1 70 1.27x27 CCR9 5LWE - -
TM1 71 1.28x28 CCR9 5LWE - -
TM1 72 1.29x29 CCR9 5LWE - -
TM1 73 1.30x30 CCR9 5LWE PAR2 5NDD
TM1 74 1.31x31 CCR9 5LWE C5a1 receptor 5O9H
TM1 75 1.32x32 A2A receptor 5G53 - -
TM1 76 1.33x33 A2A receptor 5G53 - -
TM1 77 1.34x34 A2A receptor 5G53 κ receptor 6B73
TM1 78 1.35x35 A2A receptor 5G53 μ receptor 5C1M
TM1 79 1.36x36 A2A receptor 5G53 CB1 receptor 5XRA
TM1 80 1.37x37 A2A receptor 5G53 CCR9 5LWE
TM1 81 1.38x38 A2A receptor 5G53 - -
TM1 82 1.39x39 A2A receptor 5G53 M2 receptor 4MQT
TM1 83 1.40x40 A2A receptor 5G53 A1 receptor 6D9H
TM1 84 1.41x41 A2A receptor 5G53 A1 receptor 6D9H
TM1 85 1.42x42 A2A receptor 5G53 μ receptor 5C1M
TM1 86 1.43x43 A2A receptor 5G53 M2 receptor 4MQT
TM1 87 1.44x44 A2A receptor 5G53 A1 receptor 6D9H
TM1 88 1.45x45 A2A receptor 5G53 - -
TM1 89 1.46x46 A2A receptor 5G53 μ receptor 5C1M
TM1 90 1.47x47 A2A receptor 5G53 A1 receptor 6D9H
TM1 91 1.48x48 A2A receptor 5G53 A2A receptor 5G53
TM1 92 1.49x49 A2A receptor 5G53 PAR1 3VW7
TM1 93 1.50x50 A2A receptor 5G53 A2A receptor 5G53
TM1 94 1.51x51 A2A receptor 5G53 PAF receptor 5ZKP
TM1 95 1.52x52 A2A receptor 5G53 ETB receptor 5X93
TM1 96 1.53x53 A2A receptor 5G53 A2A receptor 5G53
TM1 97 1.54x54 A2A receptor 5G53 - -
TM1 98 1.55x55 A2A receptor 5G53 A2A receptor 5G53
TM1 99 1.56x56 A2A receptor 5G53 AT2 receptor 5UNG
TM1 100 1.57x57 A2A receptor 5G53 CCR5 5UIW
TM1 101 1.58x58 A2A receptor 5G53 AT2 receptor 5UNG
TM1 102 1.59x59 A2A receptor 5G53 AT2 receptor 5UNG
TM1 103 1.60x60 A2A receptor 5G53 - -
ICL1 104 - - - -
ICL1 105 - - - -
TM2 106 2.37x37 A2A receptor 5G53 A2A receptor 5G53
TM2 107 2.38x38 A2A receptor 5G53 Rhodopsin 5DYS
TM2 108 2.39x39 A2A receptor 5G53 - -
TM2 109 2.40x40 A2A receptor 5G53 - -
TM2 110 2.41x41 A2A receptor 5G53 US28 4XT1
TM2 111 2.42x42 A2A receptor 5G53 μ receptor 5C1M
TM2 112 2.43x43 A2A receptor 5G53 μ receptor 5C1M
TM2 113 2.44x44 A2A receptor 5G53 Rhodopsin 5DYS
TM2 114 2.45x45 A2A receptor 5G53 PAR1 3VW7
TM2 115 2.46x46 A2A receptor 5G53 A2A receptor 5G53
TM2 116 2.47x47 A2A receptor 5G53 LPA6 receptor 5XSZ
TM2 117 2.48x48 A2A receptor 5G53 A2A receptor 5G53
TM2 118 2.49x49 A2A receptor 5G53 A2A receptor 5G53
TM2 119 2.50x50 A2A receptor 5G53 A2A receptor 5G53
TM2 120 2.51x51 A2A receptor 5G53 A1 receptor 6D9H
TM2 121 2.52x52 A2A receptor 5G53 M2 receptor 4MQT
TM2 122 2.53x53 A2A receptor 5G53 P2Y1 receptor 4XNW
TM2 123 2.54x54 A2A receptor 5G53 AT2 receptor 5UNG
TM2 124 2.55x55 CCR9 5LWE US28 4XT1
TM2 125 2.56x56 CCR9 5LWE OX2 receptor 5WS3
TM2 126 2.57x57 A2A receptor 5G53 - -
TM2 127 2.58x58 A2A receptor 5G53 - -
TM2 128 2.59x59 A2A receptor 5G53 NTS1 receptor 5T04
TM2 129 2.60x60 A2A receptor 5G53 β2-adrenoceptor 3SN6
TM2 130 2.61x61 A2A receptor 5G53 CB1 receptor 5XRA
TM2 131 2.62x62 A2A receptor 5G53 A1 receptor 6D9H
TM2 132 2.63x63 A2A receptor 5G53 - -
TM2 133 2.64x64 A2A receptor 5G53 - -
TM2 134 2.65x65 A2A receptor 5G53 A2A receptor 5G53
TM2 135 2.66x66 A2A receptor 5G53 NOP receptor 5DHG
ECL1 136 A2A receptor 5G53 A2A receptor 5G53
ECL1 137 A2A receptor 5G53 A2A receptor 5G53
ECL1 138 A2A receptor 5G53 A2A receptor 5G53
TM3 139 3.18x18 P2Y12 receptor 4PXZ - -
TM3 140 3.19x19 P2Y12 receptor 4PXZ - -
TM3 141 3.20x20 P2Y12 receptor 4PXZ - -
TM3 142 3.21x21 A2A receptor 5G53 - -
TM3 143 3.22x22 A2A receptor 5G53 A1 receptor 6D9H
TM3 144 3.23x23 A2A receptor 5G53 PAF receptor 5ZKP
TM3 145 3.24x24 A2A receptor 5G53 - -
TM3 146 3.25x25 A2A receptor 5G53 - -
TM3 147 3.26x26 A2A receptor 5G53 M2 receptor 4MQT
TM3 148 3.27x27 A2A receptor 5G53 A2A receptor 5G53
TM3 149 3.28x28 A2A receptor 5G53 US28 4XT1
TM3 150 3.29x29 A2A receptor 5G53 A2A receptor 5G53
TM3 151 3.30x30 A2A receptor 5G53 - -
TM3 152 3.31x31 A2A receptor 5G53 LPA6 receptor 5XSZ
TM3 153 3.32x32 A2A receptor 5G53 - -
TM3 154 3.33x33 A2A receptor 5G53 - -
TM3 155 3.34x34 A2A receptor 5G53 AT1 receptor 4ZUD
TM3 156 3.35x35 A2A receptor 5G53 CB1 receptor 5XRA
TM3 157 3.36x36 A2A receptor 5G53 CB1 receptor 5XRA
TM3 158 3.37x37 A2A receptor 5G53 Rhodopsin 5DYS
TM3 159 3.38x38 A2A receptor 5G53 OX2 receptor 5WS3
TM3 160 3.39x39 A2A receptor 5G53 CCR9 5LWE
TM3 161 3.40x40 A2A receptor 5G53 Rhodopsin 5DYS
TM3 162 3.41x41 A2A receptor 5G53 US28 4XT1
TM3 163 3.42x42 A2A receptor 5G53 CCR9 5LWE
TM3 164 3.43x43 A2A receptor 5G53 A2A receptor 5G53
TM3 165 3.44x44 A2A receptor 5G53 Rhodopsin 5DYS
TM3 166 3.45x45 A2A receptor 5G53 A2A receptor 5G53
TM3 167 3.46x46 A2A receptor 5G53 A2A receptor 5G53
TM3 168 3.47x47 A2A receptor 5G53 μ receptor 5C1M
TM3 169 3.48x48 A2A receptor 5G53 - -
TM3 170 3.49x49 A2A receptor 5G53 Rhodopsin 5DYS
TM3 171 3.50x50 A2A receptor 5G53 A2A receptor 5G53
TM3 172 3.51x51 A2A receptor 5G53 - -
TM3 173 3.52x52 A2A receptor 5G53 Rhodopsin 5DYS
TM3 174 3.53x53 A2A receptor 5G53 M2 receptor 4MQT
TM3 175 3.54x54 A2A receptor 5G53 μ receptor 5C1M
TM3 176 3.55x55 A2A receptor 5G53 - -
TM3 177 3.56x56 A2A receptor 5G53 FFA1 receptor 5TZY
ICL2 178 34.50x50 - - - -
ICL2 179 34.51x51 A2A receptor 4UHR C5a1 receptor 6C1R
ICL2 180 34.52x52 A2A receptor 4UHR C5a1 receptor 5O9H
ICL2 181 34.53x53 A2A receptor 4UHR A2A receptor 4UHR
ICL2 182 34.54x54 A2A receptor 4UHR LPA6 receptor 5XSZ
ICL2 183 34.55x55 A2A receptor 4UHR - -
ICL2 184 34.56x56 A2A receptor 4UHR - -
ICL2 185 34.57x57 - - - -
TM4 186 4.38x38 A2A receptor 5G53 US28 4XT1
TM4 187 4.39x39 A2A receptor 5G53 β2-adrenoceptor 3SN6
TM4 188 4.40x40 A2A receptor 5G53 - -
TM4 189 4.41x41 A2A receptor 5G53 5-HT2B receptor 5TUD
TM4 190 4.42x42 A2A receptor 5G53 CCR9 5LWE
TM4 191 4.43x43 A2A receptor 5G53 - -
TM4 192 4.44x44 A2A receptor 5G53 A1 receptor 6D9H
TM4 193 4.45x45 A2A receptor 5G53 μ receptor 5C1M
TM4 194 4.46x46 A2A receptor 5G53 LPA6 receptor 5XSZ
TM4 195 4.47x47 A2A receptor 5G53 5-HT2B receptor 5TUD
TM4 196 4.48x48 A2A receptor 5G53 AT2 receptor 5UNG
TM4 197 4.49x49 A2A receptor 5G53 κ receptor 6B73
TM4 198 4.50x50 A2A receptor 5G53 A2A receptor 5G53
TM4 199 4.51x51 A2A receptor 5G53 C5a1 receptor 5O9H
TM4 200 4.52x52 A2A receptor 5G53 A2A receptor 5G53
TM4 201 4.53x53 A2A receptor 5G53 - -
TM4 202 4.54x54 A2A receptor 5G53 A2A receptor 5G53
TM4 203 4.55x55 A2A receptor 5G53 FFA1 receptor 5TZY
TM4 204 4.56x56 A2A receptor 5G53 A2A receptor 5G53
TM4 205 4.57x57 A2A receptor 5G53 - -
TM4 206 4.58x58 A2A receptor 5G53 κ receptor 6B73
TM4 207 4.59x59 A2A receptor 5G53 5-HT2C receptor 6BQG
TM4 208 4.60x60 A2A receptor 5G53 - -
TM4 209 4.61x61 A2A receptor 5G53 C5a1 receptor 5O9H
TM4 210 4.62x62 A2A receptor 5G53 A2A receptor 5G53
TM4 211 4.63x63 A2A receptor 5G53 M2 receptor 4MQT
TM4 212 4.64x64 C5a1 receptor 5O9H LPA6 receptor 5XSZ
ECL2 213 - - - -
ECL2 214 - - - -
ECL2 215 - - - -
ECL2 216 - - - -
ECL2 217 - - - -
ECL2 218 - - - -
ECL2 219 - - - -
TM5 220 5.33x33 C5a1 receptor 5O9H AT2 receptor 5UNG
TM5 221 5.34x34 C5a1 receptor 5O9H - -
TM5 222 5.35x35 C5a1 receptor 5O9H - -
TM5 223 5.36x36 A2A receptor 5G53 - -
TM5 224 5.37x37 A2A receptor 5G53 PAR2 5NDD
TM5 225 5.38x38 A2A receptor 5G53 μ receptor 5C1M
TM5 226 5.39x39 A2A receptor 5G53 ETB receptor 5X93
TM5 227 5.40x40 A2A receptor 5G53 CB1 receptor 5XRA
TM5 228 5.41x41 C5a1 receptor 5O9H OX1 receptor 4ZJ8
TM5 229 5.42x42 C5a1 receptor 5O9H M2 receptor 4MQT
TM5 230 5.43x43 A2A receptor 5G53 US28 4XT1
TM5 231 5.44x44 A2A receptor 5G53 A2A receptor 5G53
TM5 232 5.45x45 A2A receptor 5G53 - -
TM5 233 5.46x46 PAR1 3VW7 A2A receptor 5G53
TM5 234 5.47x47 PAR1 3VW7 - -
TM5 235 5.48x48 A2A receptor 5G53 A2A receptor 5G53
TM5 236 5.49x49 A2A receptor 5G53 - -
TM5 237 5.50x50 A2A receptor 5G53 CB1 receptor 5XRA
TM5 238 5.51x51 A2A receptor 5G53 μ receptor 5C1M
TM5 239 5.52x52 A2A receptor 5G53 - -
TM5 240 5.53x53 A2A receptor 5G53 - -
TM5 241 5.54x54 A2A receptor 5G53 BLT1 receptor 5X33
TM5 242 5.55x55 A2A receptor 5G53 US28 4XT1
TM5 243 5.56x56 A2A receptor 5G53 PAR2 5NDD
TM5 244 5.57x57 A2A receptor 5G53 M2 receptor 4MQT
TM5 245 5.58x58 A2A receptor 5G53 - -
TM5 246 5.59x59 A2A receptor 5G53 A2A receptor 5G53
TM5 247 5.60x60 A2A receptor 5G53 μ receptor 5C1M
TM5 248 5.61x61 A2A receptor 5G53 A2A receptor 5G53
TM5 249 5.62x62 A2A receptor 5G53 AT2 receptor 5UNG
TM5 250 5.63x63 A2A receptor 5G53 Rhodopsin 5DYS
TM5 251 5.64x64 A2A receptor 5G53 A1 receptor 6D9H
TM5 252 5.65x65 A2A receptor 5G53 - -
TM5 253 5.66x66 A2A receptor 5G53 - -
TM5 254 5.67x67 A2A receptor 5G53 μ receptor 5C1M
TM5 255 5.68x68 A2A receptor 5G53 A2A receptor 5G53
ICL3 256 - - - -
ICL3 257 - - - -
ICL3 258 - - - -
TM6 259 6.30x30 A2A receptor 5G53 - -
TM6 260 6.31x31 A2A receptor 5G53 C5a1 receptor 6C1R
TM6 261 6.32x32 A2A receptor 5G53 μ receptor 5C1M
TM6 262 6.33x33 A2A receptor 5G53 AT2 receptor 5UNG
TM6 263 6.34x34 A2A receptor 5G53 - -
TM6 264 6.35x35 A2A receptor 5G53 FFA1 receptor 5TZY
TM6 265 6.36x36 A2A receptor 5G53 US28 4XT1
TM6 266 6.37x37 A2A receptor 5G53 μ receptor 5C1M
TM6 267 6.38x38 A2A receptor 5G53 - -
TM6 268 6.39x39 A2A receptor 5G53 A2A receptor 5G53
TM6 269 6.40x40 A2A receptor 5G53 - -
TM6 270 6.41x41 A2A receptor 5G53 A2A receptor 5IU4
TM6 271 6.42x42 A2A receptor 5G53 - -
TM6 272 6.43x43 A2A receptor 5G53 - -
TM6 273 6.44x44 A2A receptor 5G53 A2A receptor 5G53
TM6 274 6.45x45 A2A receptor 5G53 Rhodopsin 5DYS
TM6 275 6.46x46 A2A receptor 5G53 A2A receptor 5G53
TM6 276 6.47x47 A2A receptor 5G53 - -
TM6 277 6.48x48 A2A receptor 5G53 - -
TM6 278 6.49x49 A2A receptor 5G53 A2A receptor 5G53
TM6 279 6.50x50 A2A receptor 5G53 A2A receptor 5G53
TM6 280 6.51x51 A2A receptor 5G53 A2A receptor 5G53
TM6 281 6.52x52 A2A receptor 5G53 OX2 receptor 5WS3
TM6 282 6.53x53 A2A receptor 5G53 AT2 receptor 5UNG
TM6 283 6.54x54 A2A receptor 5G53 ETB receptor 5X93
TM6 284 6.55x55 A2A receptor 5G53 - -
TM6 285 6.56x56 A2A receptor 5G53 κ receptor 6B73
TM6 286 6.57x57 A2A receptor 5G53 μ receptor 5C1M
TM6 287 6.58x58 A2A receptor 5G53 A2A receptor 5G53
TM6 288 6.59x59 A2A receptor 5G53 Y1 receptor 5ZBH
TM6 289 6.60x60 A2A receptor 5G53 A2A receptor 5G53
TM6 290 6.61x61 A2A receptor 5G53 - -
ECL3 291 - - - -
ECL3 292 - - - -
ECL3 293 - - - -
ECL3 294 - - - -
TM7 295 7.34x33 A2A receptor 5G53 P2Y1 receptor 4XNW
TM7 296 7.35x34 A2A receptor 5G53 FFA1 receptor 5KW2
TM7 297 7.36x35 A2A receptor 5G53 A2A receptor 5G53
TM7 298 7.37x36 A2A receptor 5G53 A2A receptor 5G53
TM7 299 7.38x37 A2A receptor 5G53 - -
TM7 300 7.39x38 A2A receptor 5G53 CB1 receptor 5XRA
TM7 301 7.40x39 A2A receptor 5G53 AT2 receptor 5UNG
TM7 302 7.41x40 A2A receptor 5G53 Rhodopsin 5DYS
TM7 303 7.42x41 A2A receptor 5G53 PAF receptor 5ZKP
TM7 304 7.43x42 A2A receptor 5G53 - -
TM7 305 7.44x43 A2A receptor 5G53 M2 receptor 4MQT
TM7 306 7.45x45 A2A receptor 5G53 A2A receptor 5G53
TM7 307 7.46x46 A2A receptor 5G53 A2A receptor 5G53
TM7 308 7.47x47 A2A receptor 5G53 κ receptor 6B73
TM7 309 7.48x48 A2A receptor 5G53 OX2 receptor 5WS3
TM7 310 7.49x49 A2A receptor 5G53 A2A receptor 5G53
TM7 311 7.50x50 A2A receptor 5G53 A2A receptor 5G53
TM7 312 7.51x51 A2A receptor 5G53 LPA6 receptor 5XSZ
TM7 313 7.52x52 A2A receptor 5G53 A2A receptor 5G53
TM7 314 7.53x53 A2A receptor 5G53 A2A receptor 5G53
TM7 315 7.54x54 A2A receptor 5G53 P2Y1 receptor 4XNW
TM7 316 7.55x55 A2A receptor 5G53 AT2 receptor 5UNG
TM7 317 7.56x56 A2A receptor 5G53 AT2 receptor 5UNG
H8 318 8.47x47 A2A receptor 5G53 US28 4XT1
H8 319 8.48x48 A2A receptor 5G53 - -
H8 320 8.49x49 A2A receptor 5G53 - -
H8 321 8.50x50 A2A receptor 5G53 - -
H8 322 8.51x51 A2A receptor 5G53 5-HT1B receptor 6G79
H8 323 8.52x52 A2A receptor 5G53 M2 receptor 3UON
H8 324 8.53x53 A2A receptor 5G53 - -
H8 325 8.54x54 A2A receptor 5G53 AT2 receptor 5UNG
H8 326 8.55x55 A2A receptor 5G53 M2 receptor 4MQT
H8 327 8.56x56 A2A receptor 5G53 β2-adrenoceptor 3SN6
H8 328 8.57x57 A2A receptor 5G53 - -
H8 329 8.58x58 A2A receptor 5G53 M2 receptor 4MQT
H8 330 8.59x59 A2A receptor 5G53 A2A receptor 5G53
H8 331 8.60x60 A2A receptor 5G53 - -
H8 332 8.61x61 CCR9 5LWE - -
H8 333 8.62x62 CCR9 5LWE - -
H8 334 8.63x63 CCR9 5LWE - -
H8 335 8.64x64 CCR9 5LWE A2A receptor 4UHR
H8 336 8.65x65 CCR9 5LWE - -
H8 337 8.66x66 CCR9 5LWE - -
H8 338 8.67x67 CCR9 5LWE CCR9 5LWE
C-term 339 - - - -
C-term 340 - - - -
C-term 341 - - - -
C-term 342 - - - -
C-term 343 - - - -