3VW7_refined

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Intermediate (Δ distance (Å): 6.18 docs)

VERSION

2019-09-03

MODEL

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

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MAIN TEMPLATE

PAR1 (sequence similarity: 100%) PDB: 3VW7

TEMPLATES

3VW7 (PAR1)
4DJH (κ receptor)
6B73 (κ receptor)
5NDD (PAR2)
5VBL (apelin receptor)
None
Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 87.5 8.2 4.3
Side-chains 86.8 5.9 7.2

Number of backbone templates: 5
Number of rotamer templates: 16

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 91 PAR1 3VW7 PAR1 3VW7
N-term 92 PAR1 3VW7 PAR1 3VW7
N-term 93 PAR1 3VW7 PAR1 3VW7
N-term 94 PAR1 3VW7 PAR1 3VW7
N-term 95 PAR1 3VW7 PAR1 3VW7
N-term 96 PAR1 3VW7 PAR1 3VW7
N-term 97 PAR1 3VW7 PAR1 3VW7
N-term 98 PAR1 3VW7 PAR1 3VW7
TM1 99 1.29x29 PAR1 3VW7 PAR1 3VW7
TM1 100 1.30x30 PAR1 3VW7 PAR1 3VW7
TM1 101 1.31x31 PAR1 3VW7 PAR1 3VW7
TM1 102 1.32x32 PAR1 3VW7 PAR1 3VW7
TM1 103 1.33x33 PAR1 3VW7 PAR1 3VW7
TM1 104 1.34x34 PAR1 3VW7 PAR1 3VW7
TM1 105 1.35x35 PAR1 3VW7 PAR1 3VW7
TM1 106 1.36x36 PAR1 3VW7 PAR1 3VW7
TM1 107 1.37x37 PAR1 3VW7 PAR1 3VW7
TM1 108 1.38x38 PAR1 3VW7 PAR1 3VW7
TM1 109 1.39x39 PAR1 3VW7 PAR1 3VW7
TM1 110 1.40x40 PAR1 3VW7 PAR1 3VW7
TM1 111 1.41x41 PAR1 3VW7 PAR1 3VW7
TM1 112 1.42x42 PAR1 3VW7 PAR1 3VW7
TM1 113 1.43x43 PAR1 3VW7 PAR1 3VW7
TM1 114 1.44x44 PAR1 3VW7 PAR1 3VW7
TM1 115 1.45x45 PAR1 3VW7 PAR1 3VW7
TM1 116 1.46x46 PAR1 3VW7 PAR1 3VW7
TM1 117 1.47x47 PAR1 3VW7 PAR1 3VW7
TM1 118 1.48x48 PAR1 3VW7 PAR1 3VW7
TM1 119 1.49x49 PAR1 3VW7 PAR1 3VW7
TM1 120 1.50x50 PAR1 3VW7 PAR1 3VW7
TM1 121 1.51x51 PAR1 3VW7 PAR1 3VW7
TM1 122 1.52x52 PAR1 3VW7 PAR1 3VW7
TM1 123 1.53x53 PAR1 3VW7 PAR1 3VW7
TM1 124 1.54x54 PAR1 3VW7 PAR1 3VW7
TM1 125 1.55x55 PAR1 3VW7 PAR1 3VW7
TM1 126 1.56x56 PAR1 3VW7 PAR1 3VW7
TM1 127 1.57x57 PAR1 3VW7 PAR1 3VW7
TM1 128 1.58x58 PAR1 3VW7 PAR1 3VW7
TM1 129 1.59x59 PAR1 3VW7 PAR1 3VW7
TM1 130 1.60x60 PAR1 3VW7 PAR1 3VW7
ICL1 131 12.48x48 - - - -
ICL1 132 12.49x49 κ receptor 4DJH 5-HT2B receptor 4NC3
ICL1 133 12.50x50 κ receptor 4DJH - -
ICL1 134 12.51x51 - - - -
TM2 135 2.37x37 PAR1 3VW7 PAR1 3VW7
TM2 136 2.38x38 PAR1 3VW7 PAR1 3VW7
TM2 137 2.39x39 PAR1 3VW7 PAR1 3VW7
TM2 138 2.40x40 PAR1 3VW7 PAR1 3VW7
TM2 139 2.41x41 PAR1 3VW7 PAR1 3VW7
TM2 140 2.42x42 PAR1 3VW7 PAR1 3VW7
TM2 141 2.43x43 PAR1 3VW7 PAR1 3VW7
TM2 142 2.44x44 PAR1 3VW7 PAR1 3VW7
TM2 143 2.45x45 PAR1 3VW7 PAR1 3VW7
TM2 144 2.46x46 PAR1 3VW7 PAR1 3VW7
TM2 145 2.47x47 PAR1 3VW7 PAR1 3VW7
TM2 146 2.48x48 PAR1 3VW7 PAR1 3VW7
TM2 147 2.49x49 PAR1 3VW7 PAR1 3VW7
TM2 148 2.50x50 PAR1 3VW7 PAR1 3VW7
TM2 149 2.51x51 PAR1 3VW7 PAR1 3VW7
TM2 150 2.52x52 PAR1 3VW7 PAR1 3VW7
TM2 151 2.53x53 PAR1 3VW7 PAR1 3VW7
TM2 152 2.54x54 PAR1 3VW7 PAR1 3VW7
TM2 153 2.55x55 PAR1 3VW7 PAR1 3VW7
TM2 154 2.56x56 PAR1 3VW7 PAR1 3VW7
TM2 155 2.57x57 PAR1 3VW7 PAR1 3VW7
TM2 156 2.58x58 PAR1 3VW7 PAR1 3VW7
TM2 157 2.59x59 PAR1 3VW7 PAR1 3VW7
TM2 158 2.60x60 PAR1 3VW7 PAR1 3VW7
TM2 159 2.61x61 PAR1 3VW7 PAR1 3VW7
TM2 160 2.62x62 PAR1 3VW7 PAR1 3VW7
TM2 161 2.63x63 PAR1 3VW7 PAR1 3VW7
TM2 162 2.64x64 PAR1 3VW7 PAR1 3VW7
TM2 163 2.65x65 PAR1 3VW7 PAR1 3VW7
TM2 164 2.66x66 PAR1 3VW7 PAR1 3VW7
ECL1 165 PAR1 3VW7 PAR1 3VW7
ECL1 166 PAR1 3VW7 PAR1 3VW7
ECL1 167 23.49x49 PAR1 3VW7 PAR1 3VW7
ECL1 168 23.50x50 PAR1 3VW7 PAR1 3VW7
ECL1 169 23.51x51 PAR1 3VW7 PAR1 3VW7
ECL1 170 23.52x52 PAR1 3VW7 PAR1 3VW7
TM3 171 3.21x21 PAR1 3VW7 PAR1 3VW7
TM3 172 3.22x22 PAR1 3VW7 PAR1 3VW7
TM3 173 3.23x23 PAR1 3VW7 PAR1 3VW7
TM3 174 3.24x24 PAR1 3VW7 PAR1 3VW7
TM3 175 3.25x25 PAR1 3VW7 PAR1 3VW7
TM3 176 3.26x26 PAR1 3VW7 PAR1 3VW7
TM3 177 3.27x27 PAR1 3VW7 PAR1 3VW7
TM3 178 3.28x28 PAR1 3VW7 PAR1 3VW7
TM3 179 3.29x29 PAR1 3VW7 PAR1 3VW7
TM3 180 3.30x30 PAR1 3VW7 PAR1 3VW7
TM3 181 3.31x31 PAR1 3VW7 PAR1 3VW7
TM3 182 3.32x32 PAR1 3VW7 PAR1 3VW7
TM3 183 3.33x33 PAR1 3VW7 PAR1 3VW7
TM3 184 3.34x34 PAR1 3VW7 PAR1 3VW7
TM3 185 3.35x35 PAR1 3VW7 PAR1 3VW7
TM3 186 3.36x36 PAR1 3VW7 PAR1 3VW7
TM3 187 3.37x37 PAR1 3VW7 PAR1 3VW7
TM3 188 3.38x38 PAR1 3VW7 PAR1 3VW7
TM3 189 3.39x39 PAR1 3VW7 PAR1 3VW7
TM3 190 3.40x40 PAR1 3VW7 PAR1 3VW7
TM3 191 3.41x41 PAR1 3VW7 PAR1 3VW7
TM3 192 3.42x42 PAR1 3VW7 PAR1 3VW7
TM3 193 3.43x43 PAR1 3VW7 PAR1 3VW7
TM3 194 3.44x44 PAR1 3VW7 PAR1 3VW7
TM3 195 3.45x45 PAR1 3VW7 PAR1 3VW7
TM3 196 3.46x46 PAR1 3VW7 PAR1 3VW7
TM3 197 3.47x47 PAR1 3VW7 PAR1 3VW7
TM3 198 3.48x48 PAR1 3VW7 PAR1 3VW7
TM3 199 3.49x49 PAR1 3VW7 PAR1 3VW7
TM3 200 3.50x50 PAR1 3VW7 PAR1 3VW7
TM3 201 3.51x51 PAR1 3VW7 PAR1 3VW7
TM3 202 3.52x52 PAR1 3VW7 PAR1 3VW7
TM3 203 3.53x53 PAR1 3VW7 PAR1 3VW7
TM3 204 3.54x54 PAR1 3VW7 PAR1 3VW7
TM3 205 3.55x55 PAR1 3VW7 PAR1 3VW7
TM3 206 3.56x56 PAR1 3VW7 PAR1 3VW7
ICL2 207 34.50x50 - - - -
ICL2 208 34.51x51 κ receptor 6B73 AT1 receptor 6DO1
ICL2 209 34.52x52 κ receptor 6B73 - -
ICL2 210 34.53x53 κ receptor 6B73 P2Y1 receptor 4XNW
ICL2 211 34.54x54 κ receptor 6B73 κ receptor 6B73
ICL2 212 34.55x55 κ receptor 6B73 EP3 receptor 6M9T
ICL2 213 34.56x56 κ receptor 6B73 CCR9 5LWE
ICL2 214 34.57x57 - - - -
TM4 215 4.38x38 PAR1 3VW7 PAR1 3VW7
TM4 216 4.39x39 PAR1 3VW7 PAR1 3VW7
TM4 217 4.40x40 PAR1 3VW7 PAR1 3VW7
TM4 218 4.41x41 PAR1 3VW7 PAR1 3VW7
TM4 219 4.42x42 PAR1 3VW7 PAR1 3VW7
TM4 220 4.43x43 PAR1 3VW7 PAR1 3VW7
TM4 221 4.44x44 PAR1 3VW7 PAR1 3VW7
TM4 222 4.45x45 PAR1 3VW7 PAR1 3VW7
TM4 223 4.46x46 PAR1 3VW7 PAR1 3VW7
TM4 224 4.47x47 PAR1 3VW7 PAR1 3VW7
TM4 225 4.48x48 PAR1 3VW7 PAR1 3VW7
TM4 226 4.49x49 PAR1 3VW7 PAR1 3VW7
TM4 227 4.50x50 PAR1 3VW7 PAR1 3VW7
TM4 228 4.51x51 PAR1 3VW7 PAR1 3VW7
TM4 229 4.52x52 PAR1 3VW7 PAR1 3VW7
TM4 230 4.53x53 PAR1 3VW7 PAR1 3VW7
TM4 231 4.54x54 PAR1 3VW7 PAR1 3VW7
TM4 232 4.55x55 PAR1 3VW7 PAR1 3VW7
TM4 233 4.56x56 PAR1 3VW7 PAR1 3VW7
TM4 234 4.57x57 PAR1 3VW7 PAR1 3VW7
TM4 235 4.58x59 PAR1 3VW7 PAR1 3VW7
TM4 236 4.59x60 PAR1 3VW7 PAR1 3VW7
TM4 237 4.60x61 PAR1 3VW7 PAR1 3VW7
TM4 238 4.61x62 PAR1 3VW7 PAR1 3VW7
TM4 239 4.62x63 PAR1 3VW7 PAR1 3VW7
TM4 240 4.63x64 PAR1 3VW7 PAR1 3VW7
ECL2 241 PAR1 3VW7 PAR1 3VW7
ECL2 242 PAR1 3VW7 PAR1 3VW7
ECL2 243 PAR1 3VW7 PAR1 3VW7
ECL2 244 PAR1 3VW7 PAR1 3VW7
ECL2 245 PAR1 3VW7 PAR1 3VW7
ECL2 246 PAR1 3VW7 PAR1 3VW7
ECL2 247 PAR1 3VW7 PAR1 3VW7
ECL2 248 PAR1 3VW7 PAR1 3VW7
ECL2 249 PAR1 3VW7 PAR1 3VW7
ECL2 250 PAR1 3VW7 - -
ECL2 251 PAR1 3VW7 PAR1 3VW7
ECL2 252 PAR1 3VW7 PAR1 3VW7
ECL2 253 PAR1 3VW7 PAR1 3VW7
ECL2 254 45.50x50 PAR1 3VW7 PAR1 3VW7
ECL2 255 45.51x51 PAR1 3VW7 PAR1 3VW7
ECL2 256 45.52x52 PAR1 3VW7 PAR1 3VW7
ECL2 257 PAR1 3VW7 PAR1 3VW7
ECL2 258 PAR1 3VW7 PAR1 3VW7
ECL2 259 PAR1 3VW7 - -
ECL2 260 PAR1 3VW7 PAR1 3VW7
ECL2 261 PAR1 3VW7 PAR1 3VW7
ECL2 262 PAR1 3VW7 PAR1 3VW7
ECL2 263 PAR1 3VW7 PAR1 3VW7
TM5 264 5.32x32 PAR1 3VW7 PAR1 3VW7
TM5 265 5.33x33 PAR1 3VW7 PAR1 3VW7
TM5 266 5.34x34 PAR1 3VW7 PAR1 3VW7
TM5 267 5.35x35 PAR1 3VW7 PAR1 3VW7
TM5 268 5.36x36 PAR1 3VW7 PAR1 3VW7
TM5 269 5.37x37 PAR1 3VW7 PAR1 3VW7
TM5 270 5.38x38 PAR1 3VW7 PAR1 3VW7
TM5 271 5.39x39 PAR1 3VW7 PAR1 3VW7
TM5 272 5.40x40 PAR1 3VW7 PAR1 3VW7
TM5 273 5.41x41 PAR1 3VW7 PAR1 3VW7
TM5 274 5.42x42 PAR1 3VW7 PAR1 3VW7
TM5 275 5.43x43 PAR1 3VW7 PAR1 3VW7
TM5 276 5.44x44 PAR1 3VW7 PAR1 3VW7
TM5 277 5.45x45 PAR1 3VW7 PAR1 3VW7
TM5 278 5.46x46 PAR1 3VW7 PAR1 3VW7
TM5 279 5.47x47 PAR1 3VW7 PAR1 3VW7
TM5 280 5.48x48 PAR1 3VW7 PAR1 3VW7
TM5 281 5.49x49 PAR1 3VW7 PAR1 3VW7
TM5 282 5.50x50 PAR1 3VW7 PAR1 3VW7
TM5 283 5.51x51 PAR1 3VW7 PAR1 3VW7
TM5 284 5.52x52 PAR1 3VW7 PAR1 3VW7
TM5 285 5.53x53 PAR1 3VW7 PAR1 3VW7
TM5 286 5.54x54 PAR1 3VW7 PAR1 3VW7
TM5 287 5.55x55 PAR1 3VW7 PAR1 3VW7
TM5 288 5.56x56 PAR1 3VW7 PAR1 3VW7
TM5 289 5.57x57 PAR1 3VW7 PAR1 3VW7
TM5 290 5.58x58 PAR1 3VW7 PAR1 3VW7
TM5 291 5.59x59 PAR1 3VW7 PAR1 3VW7
TM5 292 5.60x60 PAR1 3VW7 PAR1 3VW7
TM5 293 5.61x61 PAR1 3VW7 PAR1 3VW7
TM5 294 5.62x62 PAR1 3VW7 PAR1 3VW7
TM5 295 5.63x63 PAR1 3VW7 PAR1 3VW7
TM5 296 5.64x64 PAR1 3VW7 PAR1 3VW7
TM5 297 5.65x65 PAR1 3VW7 PAR1 3VW7
TM5 298 5.66x66 PAR1 3VW7 PAR1 3VW7
TM5 299 5.67x67 PAR1 3VW7 PAR1 3VW7
ICL3 300 - - - -
ICL3 301 - - - -
ICL3 302 - - - -
ICL3 303 - - - -
TM6 304 6.26x27 PAR1 3VW7 PAR1 3VW7
TM6 305 6.27x28 PAR1 3VW7 PAR1 3VW7
TM6 306 6.28x29 PAR1 3VW7 PAR1 3VW7
TM6 307 6.29x30 PAR1 3VW7 PAR1 3VW7
TM6 308 6.30x31 PAR1 3VW7 PAR1 3VW7
TM6 309 6.31x32 PAR1 3VW7 PAR1 3VW7
TM6 310 6.32x33 PAR1 3VW7 PAR1 3VW7
TM6 311 6.33x34 PAR1 3VW7 PAR1 3VW7
TM6 312 6.34x35 PAR1 3VW7 PAR1 3VW7
TM6 313 6.35x36 PAR1 3VW7 PAR1 3VW7
TM6 314 6.36x37 PAR1 3VW7 PAR1 3VW7
TM6 315 6.37x38 PAR1 3VW7 PAR1 3VW7
TM6 316 6.38x39 PAR1 3VW7 PAR1 3VW7
TM6 317 6.39x40 PAR1 3VW7 PAR1 3VW7
TM6 318 6.40x41 PAR1 3VW7 PAR1 3VW7
TM6 319 6.41x42 PAR1 3VW7 PAR1 3VW7
TM6 320 6.42x43 PAR1 3VW7 PAR1 3VW7
TM6 321 6.43x44 PAR1 3VW7 PAR1 3VW7
TM6 322 6.44x45 PAR1 3VW7 PAR1 3VW7
TM6 323 6.45x46 PAR1 3VW7 PAR1 3VW7
TM6 324 6.46x461 PAR1 3VW7 PAR1 3VW7
TM6 325 6.47x47 PAR1 3VW7 PAR1 3VW7
TM6 326 6.48x48 PAR1 3VW7 PAR1 3VW7
TM6 327 6.49x49 PAR1 3VW7 PAR1 3VW7
TM6 328 6.50x50 PAR1 3VW7 PAR1 3VW7
TM6 329 6.51x51 PAR1 3VW7 PAR1 3VW7
TM6 330 6.52x52 PAR1 3VW7 PAR1 3VW7
TM6 331 6.53x53 PAR1 3VW7 PAR1 3VW7
TM6 332 6.54x54 PAR1 3VW7 PAR1 3VW7
TM6 333 6.55x55 PAR1 3VW7 PAR1 3VW7
TM6 334 6.56x56 PAR1 3VW7 PAR1 3VW7
TM6 335 6.57x57 PAR1 3VW7 PAR1 3VW7
TM6 336 6.58x58 PAR1 3VW7 PAR1 3VW7
TM6 337 6.59x59 PAR1 3VW7 PAR1 3VW7
TM6 338 6.60x60 PAR1 3VW7 PAR1 3VW7
TM6 339 6.61x61 PAR1 3VW7 PAR1 3VW7
TM6 340 6.62x62 PAR1 3VW7 PAR1 3VW7
ECL3 341 PAR1 3VW7 PAR1 3VW7
ECL3 342 PAR1 3VW7 PAR1 3VW7
ECL3 343 PAR1 3VW7 PAR1 3VW7
ECL3 344 PAR1 3VW7 PAR1 3VW7
ECL3 345 PAR1 3VW7 PAR1 3VW7
TM7 346 7.28x27 PAR1 3VW7 PAR1 3VW7
TM7 347 7.29x28 PAR1 3VW7 PAR1 3VW7
TM7 348 7.30x29 PAR1 3VW7 PAR1 3VW7
TM7 349 7.31x30 PAR1 3VW7 PAR1 3VW7
TM7 350 7.32x31 PAR1 3VW7 PAR1 3VW7
TM7 351 7.33x32 PAR1 3VW7 PAR1 3VW7
TM7 352 7.34x33 PAR1 3VW7 PAR1 3VW7
TM7 353 7.35x34 PAR1 3VW7 PAR1 3VW7
TM7 354 7.36x35 PAR1 3VW7 PAR1 3VW7
TM7 355 7.37x36 PAR1 3VW7 PAR1 3VW7
TM7 356 7.38x37 PAR1 3VW7 PAR1 3VW7
TM7 357 7.39x38 PAR1 3VW7 PAR1 3VW7
TM7 358 7.40x39 PAR1 3VW7 PAR1 3VW7
TM7 359 7.41x40 PAR1 3VW7 PAR1 3VW7
TM7 360 7.42x41 PAR1 3VW7 PAR1 3VW7
TM7 361 7.43x42 PAR1 3VW7 PAR1 3VW7
TM7 362 7.44x43 PAR1 3VW7 PAR1 3VW7
TM7 363 7.45x45 PAR1 3VW7 PAR1 3VW7
TM7 364 7.46x46 PAR1 3VW7 PAR1 3VW7
TM7 365 7.47x47 PAR1 3VW7 PAR1 3VW7
TM7 366 7.48x48 PAR1 3VW7 PAR1 3VW7
TM7 367 7.49x49 PAR1 3VW7 PAR1 3VW7
TM7 368 7.50x50 PAR1 3VW7 PAR1 3VW7
TM7 369 7.51x51 PAR1 3VW7 PAR1 3VW7
TM7 370 7.52x52 PAR1 3VW7 PAR1 3VW7
TM7 371 7.53x53 PAR1 3VW7 PAR1 3VW7
TM7 372 7.54x54 PAR1 3VW7 PAR1 3VW7
TM7 373 7.55x55 PAR2 5NDD A2A receptor 4UHR
TM7 374 7.56x56 PAR2 5NDD C5a1 receptor 5O9H
H8 375 8.47x47 PAR2 5NDD PAR2 5NDD
H8 376 8.48x48 PAR2 5NDD - -
H8 377 8.49x49 PAR2 5NDD A2A receptor 4UHR
H8 378 8.50x50 PAR2 5NDD - -
H8 379 8.51x51 PAR2 5NDD AT2 receptor 5UNF
H8 380 8.52x52 PAR2 5NDD κ receptor 4DJH
H8 381 8.53x53 PAR2 5NDD CCR5 5UIW
H8 382 8.54x54 PAR2 5NDD - -
H8 383 8.55x55 PAR2 5NDD - -
H8 384 8.56x56 PAR2 5NDD P2Y12 receptor 4NTJ
H8 385 8.57x57 PAR2 5NDD A2A receptor 4UHR
H8 386 8.58x58 PAR2 5NDD PAR2 5NDD
H8 387 8.59x59 apelin receptor 5VBL ETB receptor 6IGK
H8 388 8.60x60 apelin receptor 5VBL NTS1 receptor 6OSA
H8 389 8.61x61 apelin receptor 5VBL - -
C-term 390 - - - -
C-term 391 - - - -
C-term 392 - - - -
C-term 393 - - - -
C-term 394 - - - -