FFA3 receptor homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Inactive (Δ distance (Å): -1.41 docs)

VERSION

2018-07-10

MAIN TEMPLATE

μ receptor (sequence similarity: 42%) PDB: 4DKL

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 78.6 9.5 11.9
Side-chains 18.4 59.2 22.4

Number of backbone templates: 7
Number of rotamer templates: 41

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4DKL
5VBL
5NDD
5TZY
4XNW
4XT1
5LWE
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 6 - - - -
N-term 7 - - - -
N-term 8 - - - -
N-term 9 - - - -
N-term 10 - - - -
TM1 11 1.29x29 μ receptor 4DKL A1 receptor 5UEN
TM1 12 1.30x30 μ receptor 4DKL NOP receptor 5DHG
TM1 13 1.31x31 μ receptor 4DKL CXCR4 3ODU
TM1 14 1.32x32 μ receptor 4DKL - -
TM1 15 1.33x33 μ receptor 4DKL OX2 receptor 5WS3
TM1 16 1.34x34 μ receptor 4DKL CXCR4 3ODU
TM1 17 1.35x35 μ receptor 4DKL NTS1 receptor 4BUO
TM1 18 1.36x36 μ receptor 4DKL FFA1 receptor 5TZY
TM1 19 1.37x37 μ receptor 4DKL PAR1 3VW7
TM1 20 1.38x38 μ receptor 4DKL κ receptor 4DJH
TM1 21 1.39x39 μ receptor 4DKL μ receptor 4DKL
TM1 22 1.40x40 μ receptor 4DKL NOP receptor 5DHG
TM1 23 1.41x41 μ receptor 4DKL CCR9 5LWE
TM1 24 1.42x42 μ receptor 4DKL - -
TM1 25 1.43x43 μ receptor 4DKL κ receptor 4DJH
TM1 26 1.44x44 μ receptor 4DKL CXCR4 3ODU
TM1 27 1.45x45 μ receptor 4DKL μ receptor 4DKL
TM1 28 1.46x46 μ receptor 4DKL μ receptor 4DKL
TM1 29 1.47x47 μ receptor 4DKL μ receptor 4DKL
TM1 30 1.48x48 μ receptor 4DKL Rhodopsin 1GZM
TM1 31 1.49x49 μ receptor 4DKL H1 receptor 3RZE
TM1 32 1.50x50 μ receptor 4DKL μ receptor 4DKL
TM1 33 1.51x51 μ receptor 4DKL Y1 receptor 5ZBH
TM1 34 1.52x52 μ receptor 4DKL μ receptor 4DKL
TM1 35 1.53x53 μ receptor 4DKL PAR2 5NDD
TM1 36 1.54x54 μ receptor 4DKL apelin receptor 5VBL
TM1 37 1.55x55 μ receptor 4DKL OX2 receptor 5WS3
TM1 38 1.56x56 μ receptor 4DKL μ receptor 4DKL
TM1 39 1.57x57 μ receptor 4DKL M3 receptor 4U15
TM1 40 1.58x58 μ receptor 4DKL μ receptor 4DKL
TM1 41 1.59x59 μ receptor 4DKL - -
TM1 42 1.60x60 μ receptor 4DKL - -
ICL1 43 - - - -
ICL1 44 apelin receptor 5VBL - -
ICL1 45 apelin receptor 5VBL - -
ICL1 46 apelin receptor 5VBL - -
ICL1 47 - - - -
TM2 48 2.37x37 μ receptor 4DKL - -
TM2 49 2.38x38 μ receptor 4DKL μ receptor 4DKL
TM2 50 2.39x39 μ receptor 4DKL NTS1 receptor 4BUO
TM2 51 2.40x40 μ receptor 4DKL CXCR4 3ODU
TM2 52 2.41x41 μ receptor 4DKL AT1 receptor 4ZUD
TM2 53 2.42x42 μ receptor 4DKL D2 receptor 6CM4
TM2 54 2.43x43 μ receptor 4DKL CCR9 5LWE
TM2 55 2.44x44 μ receptor 4DKL CXCR4 3ODU
TM2 56 2.45x45 μ receptor 4DKL μ receptor 4DKL
TM2 57 2.46x46 μ receptor 4DKL μ receptor 4DKL
TM2 58 2.47x47 μ receptor 4DKL PAF receptor 5ZKP
TM2 59 2.48x48 μ receptor 4DKL D4 receptor 5WIV
TM2 60 2.49x49 μ receptor 4DKL CCR2 5T1A
TM2 61 2.50x50 μ receptor 4DKL μ receptor 4DKL
TM2 62 2.51x51 μ receptor 4DKL CXCR4 3ODU
TM2 63 2.52x52 μ receptor 4DKL μ receptor 4DKL
TM2 64 2.53x53 μ receptor 4DKL D4 receptor 5WIV
TM2 65 2.54x54 μ receptor 4DKL NOP receptor 5DHG
TM2 66 2.55x55 μ receptor 4DKL NOP receptor 5DHG
TM2 67 2.56x56 μ receptor 4DKL - -
TM2 68 2.57x57 μ receptor 4DKL μ receptor 4DKL
TM2 69 2.58x58 μ receptor 4DKL μ receptor 4DKL
TM2 70 2.59x59 μ receptor 4DKL μ receptor 4DKL
TM2 71 2.60x60 μ receptor 4DKL LPA6 receptor 5XSZ
TM2 72 2.61x61 μ receptor 4DKL LPA1 receptor 4Z35
TM2 73 2.62x62 μ receptor 4DKL μ receptor 4DKL
TM2 74 2.63x63 μ receptor 4DKL FFA1 receptor 5TZY
TM2 75 2.64x64 μ receptor 4DKL CXCR4 3ODU
TM2 76 2.65x65 μ receptor 4DKL AT1 receptor 4ZUD
TM2 77 2.66x66 μ receptor 4DKL CCR2 5T1A
ECL1 78 - - - -
ECL1 79 PAR2 5NDD - -
ECL1 80 23.49x49 PAR2 5NDD C5a1 receptor 5O9H
ECL1 81 23.50x50 PAR2 5NDD PAR2 5NDD
ECL1 82 23.51x51 PAR2 5NDD μ receptor 4DKL
ECL1 83 23.52x52 - - - -
TM3 84 3.21x21 μ receptor 4DKL 5-HT2C receptor 6BQH
TM3 85 3.22x22 μ receptor 4DKL A1 receptor 5UEN
TM3 86 3.23x23 μ receptor 4DKL μ receptor 4DKL
TM3 87 3.24x24 μ receptor 4DKL μ receptor 4DKL
TM3 88 3.25x25 μ receptor 4DKL μ receptor 4DKL
TM3 89 3.26x26 μ receptor 4DKL 5-HT2C receptor 6BQH
TM3 90 3.27x27 μ receptor 4DKL CCR2 5T1A
TM3 91 3.28x28 μ receptor 4DKL apelin receptor 5VBL
TM3 92 3.29x29 μ receptor 4DKL Rhodopsin 1GZM
TM3 93 3.30x30 μ receptor 4DKL Y1 receptor 5ZBH
TM3 94 3.31x31 μ receptor 4DKL μ receptor 4DKL
TM3 95 3.32x32 μ receptor 4DKL PAR2 5NDD
TM3 96 3.33x33 μ receptor 4DKL CCR5 5UIW
TM3 97 3.34x34 μ receptor 4DKL LPA1 receptor 4Z35
TM3 98 3.35x35 μ receptor 4DKL P2Y12 receptor 4NTJ
TM3 99 3.36x36 μ receptor 4DKL Y1 receptor 5ZBH
TM3 100 3.37x37 μ receptor 4DKL CXCR4 3ODU
TM3 101 3.38x38 μ receptor 4DKL - -
TM3 102 3.39x39 μ receptor 4DKL NTS1 receptor 4BUO
TM3 103 3.40x40 μ receptor 4DKL apelin receptor 5VBL
TM3 104 3.41x41 μ receptor 4DKL CCR9 5LWE
TM3 105 3.42x42 μ receptor 4DKL CCR2 5T1A
TM3 106 3.43x43 μ receptor 4DKL μ receptor 4DKL
TM3 107 3.44x44 μ receptor 4DKL CXCR4 3ODU
TM3 108 3.45x45 μ receptor 4DKL NOP receptor 5DHG
TM3 109 3.46x46 μ receptor 4DKL - -
TM3 110 3.47x47 μ receptor 4DKL μ receptor 4DKL
TM3 111 3.48x48 μ receptor 4DKL AT1 receptor 4ZUD
TM3 112 3.49x49 μ receptor 4DKL Y1 receptor 5ZBH
TM3 113 3.50x50 μ receptor 4DKL μ receptor 4DKL
TM3 114 3.51x51 μ receptor 4DKL D4 receptor 5WIV
TM3 115 3.52x52 μ receptor 4DKL CXCR4 3ODU
TM3 116 3.53x53 μ receptor 4DKL H1 receptor 3RZE
TM3 117 3.54x54 μ receptor 4DKL μ receptor 4DKL
TM3 118 3.55x55 μ receptor 4DKL CCR9 5LWE
TM3 119 3.56x56 μ receptor 4DKL μ receptor 4DKL
ICL2 120 34.50x50 - - - -
ICL2 121 34.51x51 FFA1 receptor 5TZY FFA1 receptor 5TZY
ICL2 122 34.52x52 FFA1 receptor 5TZY C5a1 receptor 5O9H
ICL2 123 34.53x53 FFA1 receptor 5TZY FFA1 receptor 5TZY
ICL2 124 34.54x54 FFA1 receptor 5TZY A1 receptor 5UEN
ICL2 125 34.55x55 FFA1 receptor 5TZY CCR9 5LWE
ICL2 126 34.56x56 FFA1 receptor 5TZY P2Y1 receptor 4XNW
ICL2 127 34.57x57 - - - -
TM4 128 4.38x38 μ receptor 4DKL FFA1 receptor 5TZY
TM4 129 4.39x39 μ receptor 4DKL CXCR4 3ODU
TM4 130 4.40x40 μ receptor 4DKL C5a1 receptor 5O9H
TM4 131 4.41x41 μ receptor 4DKL US28 4XT1
TM4 132 4.42x42 μ receptor 4DKL μ receptor 4DKL
TM4 133 4.43x43 μ receptor 4DKL M2 receptor 3UON
TM4 134 4.44x44 μ receptor 4DKL δ receptor 4N6H
TM4 135 4.45x45 μ receptor 4DKL μ receptor 4DKL
TM4 136 4.46x46 μ receptor 4DKL CCR2 5T1A
TM4 137 4.47x47 μ receptor 4DKL μ receptor 4DKL
TM4 138 4.48x48 μ receptor 4DKL NOP receptor 5DHG
TM4 139 4.49x49 μ receptor 4DKL A2A receptor 3VG9
TM4 140 4.50x50 μ receptor 4DKL μ receptor 4DKL
TM4 141 4.51x51 μ receptor 4DKL κ receptor 4DJH
TM4 142 4.52x52 μ receptor 4DKL μ receptor 4DKL
TM4 143 4.53x53 μ receptor 4DKL NOP receptor 5DHG
TM4 144 4.54x54 μ receptor 4DKL μ receptor 4DKL
TM4 145 4.55x55 μ receptor 4DKL μ receptor 4DKL
TM4 146 4.56x56 μ receptor 4DKL FFA1 receptor 5TZY
TM4 147 4.57x57 μ receptor 4DKL CCR9 5LWE
TM4 148 4.58x58 μ receptor 4DKL P2Y1 receptor 4XNW
TM4 149 4.59x59 μ receptor 4DKL CCR2 5T1A
TM4 150 4.60x60 μ receptor 4DKL μ receptor 4DKL
TM4 151 4.61x61 μ receptor 4DKL - -
TM4 152 4.62x62 μ receptor 4DKL κ receptor 4DJH
TM4 153 4.63x63 μ receptor 4DKL CXCR4 3ODU
ECL2 154 - - - -
ECL2 155 - - - -
ECL2 156 - - - -
ECL2 157 - - - -
ECL2 158 - - - -
ECL2 159 - - - -
ECL2 160 - - - -
ECL2 161 - - - -
ECL2 162 - - - -
ECL2 163 - - - -
ECL2 164 - - - -
ECL2 165 - - - -
ECL2 166 - - - -
ECL2 167 - - - -
ECL2 168 - - - -
ECL2 169 45.50x50 μ receptor 4DKL μ receptor 4DKL
ECL2 170 45.51x51 μ receptor 4DKL apelin receptor 5VBL
ECL2 171 45.52x52 μ receptor 4DKL μ receptor 4DKL
ECL2 172 - - - -
ECL2 173 PAR2 5NDD - -
ECL2 174 PAR2 5NDD - -
ECL2 175 PAR2 5NDD - -
ECL2 176 PAR2 5NDD - -
ECL2 177 - - - -
TM5 178 5.32x33 μ receptor 4DKL P2Y1 receptor 4XNW
TM5 179 5.33x34 μ receptor 4DKL apelin receptor 5VBL
TM5 180 5.34x35 μ receptor 4DKL - -
TM5 181 5.35x36 μ receptor 4DKL NTS1 receptor 4BUO
TM5 182 5.36x37 μ receptor 4DKL κ receptor 4DJH
TM5 183 5.37x38 μ receptor 4DKL FFA1 receptor 5TZY
TM5 184 5.38x39 μ receptor 4DKL C5a1 receptor 5O9H
TM5 185 5.39x40 μ receptor 4DKL FFA1 receptor 5TZY
TM5 186 5.40x41 μ receptor 4DKL AT1 receptor 4ZUD
TM5 187 5.41x42 μ receptor 4DKL US28 4XT1
TM5 188 5.42x43 μ receptor 4DKL Rhodopsin 1GZM
TM5 189 5.43x44 μ receptor 4DKL M2 receptor 3UON
TM5 190 5.44x45 μ receptor 4DKL D3 receptor 3PBL
TM5 191 5.45x46 μ receptor 4DKL CXCR4 3ODU
TM5 192 5.46x461 μ receptor 4DKL FFA1 receptor 5TZY
TM5 193 5.47x47 μ receptor 4DKL μ receptor 4DKL
TM5 194 5.48x48 μ receptor 4DKL κ receptor 4DJH
TM5 195 5.49x49 μ receptor 4DKL NOP receptor 5DHG
TM5 196 5.50x50 μ receptor 4DKL μ receptor 4DKL
TM5 197 5.51x51 μ receptor 4DKL CCR2 5T1A
TM5 198 5.52x52 μ receptor 4DKL CXCR4 3ODU
TM5 199 5.53x53 μ receptor 4DKL μ receptor 4DKL
TM5 200 5.54x54 μ receptor 4DKL D2 receptor 6CM4
TM5 201 5.55x55 μ receptor 4DKL NOP receptor 5DHG
TM5 202 5.56x56 μ receptor 4DKL CB1 receptor 5TGZ
TM5 203 5.57x57 μ receptor 4DKL μ receptor 4DKL
TM5 204 5.58x58 μ receptor 4DKL μ receptor 4DKL
TM5 205 5.59x59 μ receptor 4DKL NOP receptor 5DHG
TM5 206 5.60x60 μ receptor 4DKL D3 receptor 3PBL
TM5 207 5.61x61 μ receptor 4DKL Rhodopsin 1GZM
TM5 208 5.62x62 μ receptor 4DKL Rhodopsin 1GZM
TM5 209 5.63x63 μ receptor 4DKL CB1 receptor 5TGZ
TM5 210 5.64x64 P2Y1 receptor 4XNW US28 4XT1
TM5 211 5.65x65 P2Y1 receptor 4XNW P2Y1 receptor 4XNW
TM5 212 5.66x66 P2Y1 receptor 4XNW - -
TM5 213 5.67x67 P2Y1 receptor 4XNW CCR5 4MBS
TM5 214 5.68x68 P2Y1 receptor 4XNW - -
ICL3 215 - - - -
ICL3 216 US28 4XT1 US28 4XT1
ICL3 217 - - - -
TM6 218 6.28x29 μ receptor 4DKL D3 receptor 3PBL
TM6 219 6.29x30 μ receptor 4DKL CCR5 5UIW
TM6 220 6.30x31 μ receptor 4DKL 5-HT2B receptor 4IB4
TM6 221 6.31x32 μ receptor 4DKL μ receptor 4DKL
TM6 222 6.32x33 μ receptor 4DKL PAR2 5NDD
TM6 223 6.33x34 μ receptor 4DKL CCR2 5T1A
TM6 224 6.34x35 μ receptor 4DKL FFA1 receptor 5TZY
TM6 225 6.35x36 μ receptor 4DKL - -
TM6 226 6.36x37 μ receptor 4DKL OX2 receptor 5WS3
TM6 227 6.37x38 μ receptor 4DKL μ receptor 4DKL
TM6 228 6.38x39 μ receptor 4DKL AT1 receptor 4ZUD
TM6 229 6.39x40 μ receptor 4DKL PAR1 3VW7
TM6 230 6.40x41 μ receptor 4DKL - -
TM6 231 6.41x42 μ receptor 4DKL CXCR4 3ODU
TM6 232 6.42x43 μ receptor 4DKL A2A receptor 3VG9
TM6 233 6.43x44 μ receptor 4DKL - -
TM6 234 6.44x45 μ receptor 4DKL CXCR4 3ODU
TM6 235 6.45x46 PAR2 5NDD PAR2 5NDD
TM6 236 6.46x461 PAR2 5NDD P2Y1 receptor 4XNW
TM6 237 6.47x47 PAR2 5NDD PAR2 5NDD
TM6 238 6.48x48 μ receptor 4DKL PAR2 5NDD
TM6 239 6.49x49 μ receptor 4DKL CB1 receptor 5TGZ
TM6 240 6.50x50 μ receptor 4DKL μ receptor 4DKL
TM6 241 6.51x51 μ receptor 4DKL CXCR4 3ODU
TM6 242 6.52x52 μ receptor 4DKL CCR9 5LWE
TM6 243 6.53x53 μ receptor 4DKL NOP receptor 5DHG
TM6 244 6.54x54 μ receptor 4DKL FFA1 receptor 5TZY
TM6 245 6.55x55 μ receptor 4DKL D2 receptor 6CM4
TM6 246 6.56x56 μ receptor 4DKL OX2 receptor 5WS3
TM6 247 6.57x57 μ receptor 4DKL CCR9 5LWE
TM6 248 6.58x58 μ receptor 4DKL - -
TM6 249 6.59x59 μ receptor 4DKL PAR2 5NDD
TM6 250 6.60x60 μ receptor 4DKL CCR9 5LWE
TM6 251 6.61x61 μ receptor 4DKL D4 receptor 5WIV
ECL3 252 μ receptor 4DKL - -
ECL3 253 μ receptor 4DKL - -
ECL3 254 μ receptor 4DKL - -
ECL3 255 μ receptor 4DKL - -
TM7 256 7.33x32 μ receptor 4DKL NOP receptor 5DHG
TM7 257 7.34x33 μ receptor 4DKL CXCR4 3ODU
TM7 258 7.35x34 μ receptor 4DKL BLT1 receptor 5X33
TM7 259 7.36x35 μ receptor 4DKL β2-adrenoceptor 5JQH
TM7 260 7.37x36 μ receptor 4DKL apelin receptor 5VBL
TM7 261 7.38x37 μ receptor 4DKL D4 receptor 5WIV
TM7 262 7.39x38 μ receptor 4DKL NOP receptor 5DHG
TM7 263 7.40x39 μ receptor 4DKL Y1 receptor 5ZBH
TM7 264 7.41x40 μ receptor 4DKL μ receptor 4DKL
TM7 265 7.42x41 μ receptor 4DKL apelin receptor 5VBL
TM7 266 7.43x42 μ receptor 4DKL PAR2 5NDD
TM7 267 7.44x43 μ receptor 4DKL ETB receptor 5X93
TM7 268 7.45x45 μ receptor 4DKL μ receptor 4DKL
TM7 269 7.46x46 μ receptor 4DKL μ receptor 4DKL
TM7 270 7.47x47 μ receptor 4DKL μ receptor 4DKL
TM7 271 7.48x48 μ receptor 4DKL D2 receptor 6CM4
TM7 272 7.49x49 μ receptor 4DKL PAR2 5NDD
TM7 273 7.50x50 μ receptor 4DKL μ receptor 4DKL
TM7 274 7.51x51 μ receptor 4DKL apelin receptor 5VBL
TM7 275 7.52x52 μ receptor 4DKL 5-HT2C receptor 6BQH
TM7 276 7.53x53 μ receptor 4DKL μ receptor 4DKL
TM7 277 7.54x54 μ receptor 4DKL ETB receptor 5X93
TM7 278 7.55x55 μ receptor 4DKL μ receptor 4DKL
TM7 279 7.56x56 μ receptor 4DKL 5-HT1B receptor 4IAQ
H8 280 8.47x47 μ receptor 4DKL OX2 receptor 5WS3
H8 281 8.48x48 μ receptor 4DKL - -
H8 282 8.49x49 μ receptor 4DKL - -
H8 283 8.50x50 μ receptor 4DKL μ receptor 4DKL
H8 284 8.51x51 μ receptor 4DKL Y1 receptor 5ZBH
H8 285 8.52x52 μ receptor 4DKL NOP receptor 5DHG
H8 286 8.53x53 μ receptor 4DKL CCR9 5LWE
H8 287 8.54x54 μ receptor 4DKL μ receptor 4DKL
H8 288 8.55x55 μ receptor 4DKL US28 4XT1
H8 289 8.56x56 μ receptor 4DKL β2-adrenoceptor 2RH1
H8 290 8.57x57 μ receptor 4DKL δ receptor 4N6H
H8 291 8.58x58 μ receptor 4DKL CCR9 5LWE
H8 292 8.59x59 μ receptor 4DKL 5-HT2C receptor 6BQH
H8 293 8.60x60 CCR9 5LWE - -
H8 294 8.61x61 CCR9 5LWE CCR9 5LWE
C-term 295 - - - -
C-term 296 - - - -
C-term 297 - - - -
C-term 298 - - - -
C-term 299 - - - -