GPR62 homology model

PROTEIN CLASS

Class A (Rhodopsin)

RECEPTOR

SPECIES

Homo sapiens

STATE

Inactive (Δ distance (Å): -0.43 docs)

VERSION

2018-07-10

MAIN TEMPLATE

D3 receptor (sequence similarity: 35%) PDB: 3PBL

TEMPLATES

Main template (%) Additional templates (%) No template - freely modelled (%)
Backbone 73.1 12.5 14.5
Side-chains 19.5 48.1 32.3

Number of backbone templates: 6
Number of rotamer templates: 39

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3SN6
3PBL
4PXZ
4NC3
5TVN
3RZE
None

PDB file contains GPCRdb generic numbers in the B-factor field of CA atoms

Segment Seq.num. GPCRdb# Backbone PDB Rotamer PDB
N-term 6 - - - -
N-term 7 - - - -
N-term 8 - - - -
N-term 9 - - - -
N-term 10 - - - -
TM1 11 1.29x29 β2-adrenoceptor 3SN6 β2-adrenoceptor 3SN6
TM1 12 1.30x30 β2-adrenoceptor 3SN6 β2-adrenoceptor 3SN6
TM1 13 1.31x31 β2-adrenoceptor 3SN6 CCR5 5UIW
TM1 14 1.32x32 β2-adrenoceptor 3SN6 D4 receptor 5WIV
TM1 15 1.33x33 β2-adrenoceptor 3SN6 A2A receptor 3VG9
TM1 16 1.34x34 β2-adrenoceptor 3SN6 S1P1 receptor 3V2Y
TM1 17 1.35x35 D3 receptor 3PBL - -
TM1 18 1.36x36 D3 receptor 3PBL D4 receptor 5WIV
TM1 19 1.37x37 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM1 20 1.38x38 D3 receptor 3PBL D2 receptor 6CM4
TM1 21 1.39x39 D3 receptor 3PBL M2 receptor 3UON
TM1 22 1.40x40 D3 receptor 3PBL C5a1 receptor 5O9H
TM1 23 1.41x41 D3 receptor 3PBL BLT1 receptor 5X33
TM1 24 1.42x42 D3 receptor 3PBL OX2 receptor 5WS3
TM1 25 1.43x43 D3 receptor 3PBL - -
TM1 26 1.44x44 D3 receptor 3PBL OX2 receptor 5WS3
TM1 27 1.45x45 D3 receptor 3PBL NOP receptor 5DHG
TM1 28 1.46x46 D3 receptor 3PBL OX2 receptor 5WS3
TM1 29 1.47x47 D3 receptor 3PBL D4 receptor 5WIV
TM1 30 1.48x48 D3 receptor 3PBL S1P1 receptor 3V2Y
TM1 31 1.49x49 D3 receptor 3PBL D3 receptor 3PBL
TM1 32 1.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM1 33 1.51x51 D3 receptor 3PBL D3 receptor 3PBL
TM1 34 1.52x52 D3 receptor 3PBL Y1 receptor 5ZBH
TM1 35 1.53x53 D3 receptor 3PBL Y1 receptor 5ZBH
TM1 36 1.54x54 D3 receptor 3PBL S1P1 receptor 3V2Y
TM1 37 1.55x55 D3 receptor 3PBL D4 receptor 5WIV
TM1 38 1.56x56 D3 receptor 3PBL AT1 receptor 4ZUD
TM1 39 1.57x57 D3 receptor 3PBL D3 receptor 3PBL
TM1 40 1.58x58 D3 receptor 3PBL D3 receptor 3PBL
TM1 41 1.59x59 D3 receptor 3PBL D2 receptor 6CM4
TM1 42 1.60x60 D3 receptor 3PBL S1P1 receptor 3V2Y
ICL1 43 - - - -
ICL1 44 - - - -
TM2 45 2.37x37 D3 receptor 3PBL - -
TM2 46 2.38x38 D3 receptor 3PBL - -
TM2 47 2.39x39 D3 receptor 3PBL - -
TM2 48 2.40x40 D3 receptor 3PBL BLT1 receptor 5X33
TM2 49 2.41x41 D3 receptor 3PBL H1 receptor 3RZE
TM2 50 2.42x42 D3 receptor 3PBL H1 receptor 3RZE
TM2 51 2.43x43 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM2 52 2.44x44 D3 receptor 3PBL LPA1 receptor 4Z35
TM2 53 2.45x45 D3 receptor 3PBL CXCR4 3ODU
TM2 54 2.46x46 D3 receptor 3PBL D3 receptor 3PBL
TM2 55 2.47x47 D3 receptor 3PBL - -
TM2 56 2.48x48 D3 receptor 3PBL D3 receptor 3PBL
TM2 57 2.49x49 D3 receptor 3PBL - -
TM2 58 2.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM2 59 2.51x51 D3 receptor 3PBL D3 receptor 3PBL
TM2 60 2.52x52 D3 receptor 3PBL D3 receptor 3PBL
TM2 61 2.53x53 D3 receptor 3PBL S1P1 receptor 3V2Y
TM2 62 2.54x54 D3 receptor 3PBL D3 receptor 3PBL
TM2 63 2.55x55 D3 receptor 3PBL H1 receptor 3RZE
TM2 64 2.56x551 D3 receptor 3PBL - -
TM2 65 2.57x56 D3 receptor 3PBL CB1 receptor 5TGZ
TM2 66 2.58x57 D3 receptor 3PBL D3 receptor 3PBL
TM2 67 2.59x58 D3 receptor 3PBL D3 receptor 3PBL
TM2 68 2.60x59 D3 receptor 3PBL D4 receptor 5WIV
TM2 69 2.61x60 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM2 70 2.62x61 D3 receptor 3PBL OX2 receptor 5WS3
TM2 71 2.63x62 D3 receptor 3PBL S1P1 receptor 3V2Y
TM2 72 2.64x63 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM2 73 2.65x64 D3 receptor 3PBL CXCR4 3ODU
TM2 74 2.66x65 D3 receptor 3PBL - -
TM2 75 2.67x66 D3 receptor 3PBL - -
ECL1 76 - - - -
ECL1 77 - - - -
ECL1 78 - - - -
ECL1 79 - - - -
ECL1 80 - - - -
TM3 81 3.18x18 P2Y12 receptor 4PXZ - -
TM3 82 3.19x19 P2Y12 receptor 4PXZ - -
TM3 83 3.20x20 P2Y12 receptor 4PXZ P2Y12 receptor 4PXZ
TM3 84 3.21x21 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM3 85 3.22x22 D3 receptor 3PBL D4 receptor 5WIV
TM3 86 3.23x23 D3 receptor 3PBL S1P1 receptor 3V2Y
TM3 87 3.24x24 D3 receptor 3PBL US28 5WB1
TM3 88 3.25x25 D3 receptor 3PBL D3 receptor 3PBL
TM3 89 3.26x26 D3 receptor 3PBL NTS1 receptor 4BUO
TM3 90 3.27x27 D3 receptor 3PBL D4 receptor 5WIV
TM3 91 3.28x28 D3 receptor 3PBL AT1 receptor 4ZUD
TM3 92 3.29x29 D3 receptor 3PBL P2Y1 receptor 4XNW
TM3 93 3.30x30 D3 receptor 3PBL Y1 receptor 5ZBH
TM3 94 3.31x31 D3 receptor 3PBL D3 receptor 3PBL
TM3 95 3.32x32 D3 receptor 3PBL - -
TM3 96 3.33x33 D3 receptor 3PBL OX1 receptor 4ZJ8
TM3 97 3.34x34 D3 receptor 3PBL NTS1 receptor 4BUO
TM3 98 3.35x35 D3 receptor 3PBL D4 receptor 5WIV
TM3 99 3.36x36 D3 receptor 3PBL S1P1 receptor 3V2Y
TM3 100 3.37x37 D3 receptor 3PBL - -
TM3 101 3.38x38 D3 receptor 3PBL D3 receptor 3PBL
TM3 102 3.39x39 D3 receptor 3PBL CCR9 5LWE
TM3 103 3.40x40 D3 receptor 3PBL NOP receptor 5DHG
TM3 104 3.41x41 D3 receptor 3PBL D2 receptor 6CM4
TM3 105 3.42x42 D3 receptor 3PBL - -
TM3 106 3.43x43 D3 receptor 3PBL H1 receptor 3RZE
TM3 107 3.44x44 D3 receptor 3PBL CXCR4 3ODU
TM3 108 3.45x45 D3 receptor 3PBL D3 receptor 3PBL
TM3 109 3.46x46 D3 receptor 3PBL H1 receptor 3RZE
TM3 110 3.47x47 D3 receptor 3PBL - -
TM3 111 3.48x48 D3 receptor 3PBL OX2 receptor 5WS3
TM3 112 3.49x49 D3 receptor 3PBL NTS1 receptor 4XES
TM3 113 3.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM3 114 3.51x51 D3 receptor 3PBL D3 receptor 3PBL
TM3 115 3.52x52 D3 receptor 3PBL H1 receptor 3RZE
TM3 116 3.53x53 D3 receptor 3PBL Y1 receptor 5ZBH
TM3 117 3.54x54 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM3 118 3.55x55 D3 receptor 3PBL D3 receptor 3PBL
TM3 119 3.56x56 D3 receptor 3PBL OX2 receptor 5WS3
ICL2 120 - - - -
ICL2 121 - - - -
ICL2 122 - - - -
ICL2 123 - - - -
ICL2 124 - - - -
TM4 125 4.38x38 D3 receptor 3PBL D3 receptor 3PBL
TM4 126 4.39x39 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM4 127 4.40x40 D3 receptor 3PBL CB1 receptor 5TGZ
TM4 128 4.41x41 D3 receptor 3PBL - -
TM4 129 4.42x42 D3 receptor 3PBL - -
TM4 130 4.43x43 D3 receptor 3PBL LPA1 receptor 4Z35
TM4 131 4.44x44 D3 receptor 3PBL D3 receptor 3PBL
TM4 132 4.45x45 D3 receptor 3PBL LPA1 receptor 4Z35
TM4 133 4.46x46 D3 receptor 3PBL BLT1 receptor 5X33
TM4 134 4.47x47 D3 receptor 3PBL D3 receptor 3PBL
TM4 135 4.48x48 D3 receptor 3PBL D3 receptor 3PBL
TM4 136 4.49x49 D3 receptor 3PBL D3 receptor 3PBL
TM4 137 4.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM4 138 4.51x51 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM4 139 4.52x52 D3 receptor 3PBL NTS1 receptor 4BUO
TM4 140 4.53x53 D3 receptor 3PBL D3 receptor 3PBL
TM4 141 4.54x54 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM4 142 4.55x55 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM4 143 4.56x56 D3 receptor 3PBL S1P1 receptor 3V2Y
TM4 144 4.57x57 β2-adrenoceptor 3SN6 S1P1 receptor 3V2Y
TM4 145 4.58x58 β2-adrenoceptor 3SN6 LPA1 receptor 4Z35
TM4 146 4.59x59 β2-adrenoceptor 3SN6 β2-adrenoceptor 3SN6
TM4 147 4.60x60 D3 receptor 3PBL - -
TM4 148 4.61x61 D3 receptor 3PBL D3 receptor 3PBL
TM4 149 4.62x62 D3 receptor 3PBL D3 receptor 3PBL
TM4 150 4.63x63 D3 receptor 3PBL S1P1 receptor 3V2Y
ECL2 151 - - - -
ECL2 152 5-HT2B receptor 4NC3 - -
ECL2 153 5-HT2B receptor 4NC3 - -
ECL2 154 - - - -
ECL2 155 5-HT2B receptor 4NC3 - -
ECL2 156 5-HT2B receptor 4NC3 - -
ECL2 157 5-HT2B receptor 4NC3 - -
ECL2 158 5-HT2B receptor 4NC3 - -
ECL2 159 5-HT2B receptor 4NC3 - -
ECL2 160 5-HT2B receptor 4NC3 - -
ECL2 161 - - - -
ECL2 162 45.50x50 D3 receptor 3PBL D3 receptor 3PBL
ECL2 163 45.51x51 D3 receptor 3PBL D3 receptor 3PBL
ECL2 164 45.52x52 D3 receptor 3PBL NOP receptor 5DHG
ECL2 165 - - - -
ECL2 166 H1 receptor 3RZE - -
ECL2 167 H1 receptor 3RZE - -
ECL2 168 - - - -
TM5 169 5.35x36 D3 receptor 3PBL - -
TM5 170 5.36x37 D3 receptor 3PBL 5-HT2B receptor 4IB4
TM5 171 5.37x38 D3 receptor 3PBL FFA1 receptor 5TZY
TM5 172 5.38x39 D3 receptor 3PBL D3 receptor 3PBL
TM5 173 5.39x40 D3 receptor 3PBL FFA1 receptor 5TZY
TM5 174 5.40x41 D3 receptor 3PBL - -
TM5 175 5.41x42 D3 receptor 3PBL Y1 receptor 5ZBH
TM5 176 5.42x43 D3 receptor 3PBL LPA1 receptor 4Z35
TM5 177 5.43x44 D3 receptor 3PBL H1 receptor 3RZE
TM5 178 5.44x45 D3 receptor 3PBL OX2 receptor 5WS3
TM5 179 5.45x46 D3 receptor 3PBL Y1 receptor 5ZBH
TM5 180 5.46x461 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM5 181 5.47x47 D3 receptor 3PBL D3 receptor 3PBL
TM5 182 5.48x48 D3 receptor 3PBL - -
TM5 183 5.49x49 D3 receptor 3PBL D3 receptor 3PBL
TM5 184 5.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM5 185 5.51x51 D3 receptor 3PBL PAR2 5NDD
TM5 186 5.52x52 D3 receptor 3PBL S1P1 receptor 3V2Y
TM5 187 5.53x53 D3 receptor 3PBL D4 receptor 5WIV
TM5 188 5.54x54 D3 receptor 3PBL C5a1 receptor 5O9H
TM5 189 5.55x55 D3 receptor 3PBL D2 receptor 6CM4
TM5 190 5.56x56 D3 receptor 3PBL A2A receptor 3VG9
TM5 191 5.57x57 D3 receptor 3PBL OX2 receptor 5WS3
TM5 192 5.58x58 D3 receptor 3PBL D3 receptor 3PBL
TM5 193 5.59x59 D3 receptor 3PBL δ receptor 4N6H
TM5 194 5.60x60 D3 receptor 3PBL CCR5 5UIW
TM5 195 5.61x61 D3 receptor 3PBL D3 receptor 3PBL
TM5 196 5.62x62 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM5 197 5.63x63 D3 receptor 3PBL D3 receptor 3PBL
TM5 198 5.64x64 D3 receptor 3PBL D3 receptor 3PBL
TM5 199 5.65x65 D3 receptor 3PBL β2-adrenoceptor 5JQH
TM5 200 5.66x66 D3 receptor 3PBL 5-HT2C receptor 6BQH
TM5 201 5.67x67 β2-adrenoceptor 3SN6 β2-adrenoceptor 3SN6
TM5 202 5.68x68 β2-adrenoceptor 3SN6 Rhodopsin 1GZM
TM5 203 5.69x69 β2-adrenoceptor 3SN6 5-HT2C receptor 6BQH
TM5 204 5.70x70 β2-adrenoceptor 3SN6 - -
TM5 205 5.71x71 β2-adrenoceptor 3SN6 P2Y12 receptor 4NTJ
TM5 206 5.72x72 β2-adrenoceptor 3SN6 - -
TM5 207 5.73x73 β2-adrenoceptor 3SN6 - -
TM5 208 5.74x74 β2-adrenoceptor 3SN6 - -
TM5 209 5.75x75 β2-adrenoceptor 3SN6 - -
TM5 210 5.76x76 β2-adrenoceptor 3SN6 - -
ICL3 211 - - - -
ICL3 212 - - - -
ICL3 213 - - - -
ICL3 214 - - - -
ICL3 215 - - - -
ICL3 225 - - - -
ICL3 226 - - - -
ICL3 227 - - - -
ICL3 228 - - - -
ICL3 229 - - - -
TM6 230 6.24x24 5-HT2B receptor 5TVN - -
TM6 231 6.25x25 5-HT2B receptor 5TVN LPA1 receptor 4Z35
TM6 232 6.26x26 5-HT2B receptor 5TVN - -
TM6 233 6.27x27 5-HT2B receptor 5TVN LPA1 receptor 4Z35
TM6 234 6.28x28 5-HT2B receptor 5TVN β2-adrenoceptor 3SN6
TM6 235 6.29x29 D3 receptor 3PBL P2Y1 receptor 4XNW
TM6 236 6.30x30 D3 receptor 3PBL - -
TM6 237 6.31x31 D3 receptor 3PBL US28 4XT1
TM6 238 6.32x32 D3 receptor 3PBL D3 receptor 3PBL
TM6 239 6.33x33 D3 receptor 3PBL D3 receptor 3PBL
TM6 240 6.34x34 D3 receptor 3PBL OX2 receptor 5WS3
TM6 241 6.35x35 D3 receptor 3PBL NTS1 receptor 4BUO
TM6 242 6.36x36 D3 receptor 3PBL CCR9 5LWE
TM6 243 6.37x37 D3 receptor 3PBL - -
TM6 244 6.38x38 D3 receptor 3PBL D3 receptor 3PBL
TM6 245 6.39x39 D3 receptor 3PBL A1 receptor 5UEN
TM6 246 6.40x40 D3 receptor 3PBL PAR1 3VW7
TM6 247 6.41x41 D3 receptor 3PBL D4 receptor 5WIV
TM6 248 6.42x42 D3 receptor 3PBL D3 receptor 3PBL
TM6 249 6.43x43 D3 receptor 3PBL - -
TM6 250 6.44x44 D3 receptor 3PBL D3 receptor 3PBL
TM6 251 6.45x45 D3 receptor 3PBL OX2 receptor 5WS3
TM6 252 6.46x46 D3 receptor 3PBL S1P1 receptor 3V2Y
TM6 253 6.47x47 D3 receptor 3PBL D3 receptor 3PBL
TM6 254 6.48x48 D3 receptor 3PBL D3 receptor 3PBL
TM6 255 6.49x49 D3 receptor 3PBL D3 receptor 3PBL
TM6 256 6.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM6 257 6.51x51 D3 receptor 3PBL H1 receptor 3RZE
TM6 258 6.52x52 D3 receptor 3PBL - -
TM6 259 6.53x53 D3 receptor 3PBL CCR9 5LWE
TM6 260 6.54x54 D3 receptor 3PBL ETB receptor 5X93
TM6 261 6.55x55 D3 receptor 3PBL - -
TM6 262 6.56x56 D3 receptor 3PBL S1P1 receptor 3V2Y
TM6 263 6.57x57 D3 receptor 3PBL NOP receptor 5DHG
TM6 264 6.58x58 D3 receptor 3PBL - -
ECL3 265 - - - -
ECL3 266 - - - -
ECL3 267 - - - -
ECL3 268 - - - -
ECL3 269 - - - -
ECL3 270 - - - -
ECL3 271 - - - -
TM7 272 7.35x34 D3 receptor 3PBL LPA1 receptor 4Z35
TM7 273 7.36x35 D3 receptor 3PBL CB1 receptor 5TGZ
TM7 274 7.37x36 D3 receptor 3PBL D3 receptor 3PBL
TM7 275 7.38x37 D3 receptor 3PBL D4 receptor 5WIV
TM7 276 7.39x38 D3 receptor 3PBL D3 receptor 3PBL
TM7 277 7.40x39 D3 receptor 3PBL D3 receptor 3PBL
TM7 278 7.41x40 D3 receptor 3PBL PAR1 3VW7
TM7 279 7.42x41 D3 receptor 3PBL S1P1 receptor 3V2Y
TM7 280 7.43x42 D3 receptor 3PBL D3 receptor 3PBL
TM7 281 7.44x43 D3 receptor 3PBL LPA6 receptor 5XSZ
TM7 282 7.45x45 D3 receptor 3PBL Rhodopsin 4ZWJ
TM7 283 7.46x46 D3 receptor 3PBL - -
TM7 284 7.47x47 D3 receptor 3PBL D3 receptor 3PBL
TM7 285 7.48x48 D3 receptor 3PBL OX2 receptor 5WS3
TM7 286 7.49x49 D3 receptor 3PBL - -
TM7 287 7.50x50 D3 receptor 3PBL D3 receptor 3PBL
TM7 288 7.51x51 D3 receptor 3PBL A2A receptor 3VG9
TM7 289 7.52x52 D3 receptor 3PBL NTS1 receptor 4BUO
TM7 290 7.53x53 D3 receptor 3PBL D3 receptor 3PBL
TM7 291 7.54x54 D3 receptor 3PBL AT1 receptor 4ZUD
TM7 292 7.55x55 D3 receptor 3PBL S1P1 receptor 3V2Y
TM7 293 7.56x56 D3 receptor 3PBL OX2 receptor 5WS3
H8 294 8.47x47 D3 receptor 3PBL - -
H8 295 8.48x48 D3 receptor 3PBL A2A receptor 3VG9
H8 296 8.49x49 D3 receptor 3PBL - -
H8 297 8.50x50 D3 receptor 3PBL - -
H8 298 8.51x51 D3 receptor 3PBL D3 receptor 3PBL
H8 299 8.52x52 D3 receptor 3PBL - -
H8 300 8.53x53 D3 receptor 3PBL D3 receptor 3PBL
H8 301 8.54x54 D3 receptor 3PBL Y1 receptor 5ZBH
H8 302 8.55x55 D3 receptor 3PBL 5-HT2B receptor 4IB4
H8 303 8.56x56 D3 receptor 3PBL 5-HT2B receptor 4IB4
H8 304 8.57x57 D3 receptor 3PBL β2-adrenoceptor 5JQH
H8 305 8.58x58 D3 receptor 3PBL - -
H8 306 8.59x59 D3 receptor 3PBL 5-HT2C receptor 6BQH
C-term 307 D3 receptor 3PBL D3 receptor 3PBL
C-term 308 - - - -
C-term 309 - - - -
C-term 310 - - - -
C-term 311 - - - -