Structure information

LPA1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

4Z34

SPECIES

Homo sapiens

RESOLUTION

3.000

PREFERRED CHAIN

A

PUBLICATION DATE

June 3, 2015

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
ONO-9780307 K39 N-term polar (charge-charge)
ONO-9780307 H40 N-term polar (charge-assisted hydrogen bond)
ONO-9780307 T113 23.50x50 ECL1 polar (charge-assisted hydrogen bond)
ONO-9780307 Q125 3.29x29 TM3 polar (hydrogen bond)
ONO-9780307 Q125 3.29x29 TM3 polar (hydrogen bond)
ONO-9780307 I128 3.32x32 TM3 hydrophobic
ONO-9780307 M198 ECL2 hydrophobic
ONO-9780307 W271 6.48x48 TM6 hydrophobic
ONO-9780307 L278 6.55x55 TM6 hydrophobic
ONO-9780307 L297 7.39x38 TM7 hydrophobic

Ligands

ONO-9780307

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Residue Diagrams

L N A L M I F I C V T I G L G M V L K S 1 A N L A A A D F F A G L A Y F Y L M F N 2 A L L N A V S A T L S T D I L G Q R L L 3 V V V V I V V I W T M A I V M G A I P S 4 Y L V V M V V F T V L N F I A W F V L Y 5 V I V L G A F I I C W T P G L V L L L L 6 I P N M A S N F E A L L L F F K E Y A 7
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ICL1 R R F H ICL1ECL1 T G P N T R R L ECL1ICL2 M Q L H T R M ICL2ECL2 W N C I C D I E N C S N M A P L Y ECL2ICL3 R H S S ICL3ECL3 P Q C ECL3N-term M A A I S T S I P V I S Q P Q F T A M N E P Q C F Y N E S I A F F Y N R S G K H L A T E W N N-termC-term C Q R S E N P T G P T E G S D R S A S S L N H T I L A G V H S N D H S V V C-term T V S K L V M G L G I T V C I F I M L A N L L V M V A I Y V N F P I Y Y L M A N L A A A D F F A G L A Y F Y L M F N T V S T W L L R Q G L I D T S L T A S V A N L L A I A I E R H I T V F R S N R R V V V V I V V I W T M A I V M G A I P S V G S D S Y L V F W A I F N L V T F V V M V V L Y A H I F G Y V R Q R T M R M S G P R R N R D T M M S L L K T V V I V L G A F I I C W T P G L V L L L L D V C C D V L A Y E K F F L L L A E F N S A M N P I I Y S Y R D K E F R Q M S A T I L C
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Residue Table


GPCRdb(A)
GPCRdb(A)
LPA1 receptor
ECL1
23x50 23.50x50 T113
TM3
3x29 3.29x29 Q125
3x32 3.32x32 I128
TM6
6x48 6.48x48 W271
6x55 6.55x55 L278
TM7
7x38 7.39x38 L297