Structure information

A1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

5UEN

SPECIES

Homo sapiens

RESOLUTION

3.200

PREFERRED CHAIN

B

PUBLICATION DATE

March 1, 2017

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
DU172 Y12 1.35x35 TM1 polar (hydrogen bond)
DU172 L88 3.33x33 TM3 hydrophobic
DU172 F171 45.52x52 ECL2 aromatic (face-to-face)
DU172 M180 5.38x40 TM5 polar (hydrogen bond)
DU172 L250 6.51x51 TM6 hydrophobic
DU172 N254 6.55x55 TM6 polar (hydrogen bond)
DU172 N254 6.55x55 TM6 polar (hydrogen bond)
DU172 Y271 7.36x35 TM7 polar (hydrogen bond)
DU172 Y271 7.36x35 TM7 polar (hydrogen bond)
DU172 Y271 7.36x35 TM7 polar (hydrogen bond)
DU172 I274 7.39x38 TM7 hydrophobic

Ligands

DU172

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Residue Diagrams

V N G P V S V L A I L V E I G I Y A A Q 1 V S L A V A D V A V G L A V I P L A I L I 2 A L L A L I S S Q T L I L V P C A V M L 3 A A V A I A G C W I L S F V V G L T P M 4 Y I L V M L L L P P L V W V F F N F Y V M Y 5 A L I L F L F A L S W L P L H I L N C I 6 I P N M A S N G H T L F I A I Y T L I 7
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ICL1 Q A L R ICL1ECL1 P Q T ECL1ICL2 P L R Y K M V V ICL2ECL2 W N N L S A V E R A W A A N G S M G E P V I K C E F E K V I ECL2ICL3 S A S S G ICL3ECL3 P S C H K ECL3N-term M P P S I N-termC-term I D E D L P E E R P D D C-term S A F Q A A Y I G I E V L I A L V S V P G N V L V I W A V K V N D A T F C F I V S L A V A D V A V G A L V I P L A I L I N I G Y F H T C L M V A C P V L I L T Q S S I L A L L A I A V D R Y L R V K I T P R R A A V A I A G C W I L S F V V G L T P M F G S M E Y M V Y F N F F V W V L P P L L L M V L I Y L E V F Y L I R K Q L N K K V D P Q K Y Y G K E L K I A K S L A L I L F L F A L S W L P L H I L N C I T L F C P S I L T Y I A I F L T H G N S A M N P I V Y A F R I Q K F L K H F R P P F R V T I W N D C Q P A
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Residue Table


GPCRdb(A)
GPCRdb(A)
A1 receptor
TM1
1x35 1.35x35 Y12
TM3
3x33 3.33x33 L88
ECL2
45x52 45.52x52 F171
TM5
5x40 5.38x40 M180
TM6
6x51 6.51x51 L250
6x55 6.55x55 N254
TM7
7x35 7.36x35 Y271
7x38 7.39x38 I274