PDB
5UNH
Resolution
2.9 Å
Released
April 5, 2017
Receptor
AT2
Class
A
Species
Homo sapiens
Ligand
Function
compound 2 [PMID: 28379944]
Unknown
Reference
10.1038/NATURE22035

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Ligand Amino Acid Generic Number Segment Interaction Type
compound 2 [PMID: 28379944] Y51 1.39x39 TM1 hydrophobic
compound 2 [PMID: 28379944] L93 2.53x53 TM2 hydrophobic
compound 2 [PMID: 28379944] W100 2.60x60 TM2 aromatic (pi-cation)
compound 2 [PMID: 28379944] W100 2.60x60 TM2 hydrophobic
compound 2 [PMID: 28379944] W100 2.60x60 TM2 aromatic (edge-to-face)
compound 2 [PMID: 28379944] Y103 2.63x63 TM2 Van der Waals
compound 2 [PMID: 28379944] Y104 2.64x64 TM2 hydrophobic
compound 2 [PMID: 28379944] Y108 ECL1 aromatic (edge-to-face)
compound 2 [PMID: 28379944] G121 3.29x29 TM3 Van der Waals
compound 2 [PMID: 28379944] L124 3.32x32 TM3 hydrophobic
compound 2 [PMID: 28379944] T125 3.33x33 TM3 hydrophobic
compound 2 [PMID: 28379944] M128 3.36x36 TM3 hydrophobic
compound 2 [PMID: 28379944] F129 3.37x37 TM3 hydrophobic
compound 2 [PMID: 28379944] S174 4.56x56 TM4 Van der Waals
compound 2 [PMID: 28379944] T178 4.60x61 TM4 polar (hydrogen bond)
compound 2 [PMID: 28379944] R182 4.64x65 TM4 aromatic (pi-cation)
compound 2 [PMID: 28379944] R182 4.64x65 TM4 polar (hydrogen bond)
compound 2 [PMID: 28379944] C195 45.50x50 ECL2 hydrophobic
compound 2 [PMID: 28379944] M197 45.52x52 ECL2 Van der Waals
compound 2 [PMID: 28379944] I211 5.38x39 TM5 Van der Waals
compound 2 [PMID: 28379944] M214 5.41x42 TM5 hydrophobic
compound 2 [PMID: 28379944] K215 5.42x43 TM5 hydrophobic
compound 2 [PMID: 28379944] K215 5.42x43 TM5 aromatic (pi-cation)
compound 2 [PMID: 28379944] W269 6.48x48 TM6 hydrophobic
compound 2 [PMID: 28379944] F272 6.51x51 TM6 hydrophobic
compound 2 [PMID: 28379944] F272 6.51x51 TM6 aromatic (pi-cation)
compound 2 [PMID: 28379944] I304 7.39x38 TM7 hydrophobic
compound 2 [PMID: 28379944] G307 7.42x41 TM7 Van der Waals
compound 2 [PMID: 28379944] F308 7.43x42 TM7 hydrophobic

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Snake plot — Download: PNG | SVG
ICL1 K G P K K ICL1ECL1 Y D W L F ECL1ICL2 P F L S Q R R ICL2ECL2 D V R T I E Y L G V N A C I M A F P P E ECL2ICL3 N S Y ICL3ECL3 V I N ECL3N-term M K G N S T L A T T S K N I T S G L H F G L V N I S G N N E S T L N C S Q K P S D K H L N-termC-term I T W L Q G K R E S M S C R K S S S L R E M E T F V S C-term D A I P I L Y Y I I F V I G F L V N I V V V T L F C C Q V S S I Y I F N L A V A D L L L L A T L P L W A T Y Y S Y R G P V M C K V F G S F L T L N M F A S I F F I T C M S V D R Y Q S V I Y N P W Q A S Y I V P L V W C M A C L S S L P T F Y F R K Y A Q W S A G I A L M K N I L G F I I P L I F I A T C Y F G I R K H L L K T G K N R I T R D Q V L K M A A A V V L A F I I C W L P F H V L T F L D A L A W M G S C E V I A V I D L A L P F A I L L G F T N S C V N P F L Y C F V G N R L R S P F Q Q K V F R V
Helix box plot — Download: PNG | SVG I N V L F G I V F I I Y Y L I P I A D 1 F N L A V A D L L L L A T L P L W A T Y 2 C T I F F I S A F M N L T L F S G F V K 3 A S Y I V P L V W C M A C L S S L P T 4 Y C T A I F I L P I I F G L I N K M L A I 5 A A V V L A F I I C W L P F H V L T F L 6 F P N V C S N T F G L L I A F P L A L 7

GPCRdb(A)
GPCRdb(A)
AT2 receptor
TM1
1x39 1.39x39 Y51
TM2
2x53 2.53x53 L93
2x60 2.60x60 W100
2x63 2.63x63 Y103
2x64 2.64x64 Y104
TM3
3x29 3.29x29 G121
3x32 3.32x32 L124
3x33 3.33x33 T125
3x36 3.36x36 M128
3x37 3.37x37 F129
TM4
4x56 4.56x56 S174
4x61 4.60x61 T178
4x65 4.64x65 R182
ECL2
45x50 45.50x50 C195
45x52 45.52x52 M197
TM5
5x39 5.38x39 I211
5x42 5.41x42 M214
5x43 5.42x43 K215
TM6
6x48 6.48x48 W269
6x51 6.51x51 F272
TM7
7x38 7.39x38 I304
7x41 7.42x41 G307
7x42 7.43x42 F308