Structure information

NK1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6HLL

SPECIES

Homo sapiens

RESOLUTION

3.270

PREFERRED CHAIN

A

PUBLICATION DATE

Jan. 16, 2019

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CP-99,994 P112 3.32x32 TM3 hydrophobic
CP-99,994 I113 3.33x33 TM3 hydrophobic
CP-99,994 Q165 4.60x61 TM4 polar (charge-assisted hydrogen bond)
CP-99,994 Q165 4.60x61 TM4 polar (charge-assisted hydrogen bond)
CP-99,994 H197 5.39x40 TM5 aromatic (face-to-face)
CP-99,994 F264 6.51x51 TM6 hydrophobic
CP-99,994 F268 6.55x55 TM6 hydrophobic

Ligands

CP-99,994

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Residue Diagrams

V N G V V S T V V I V T Y A A A W L V I 1 V N L A F A E A S M A A F N T V V N F T 2 A T M S Y I S A F V A A I P F F N H F K 3 T K V V I C V I W V L A L L L A F P Q 4 Y A Y G I V L L P L F Y I L V T V C I H Y 5 I V V V C T F A I C W L P F H I F F L L 6 I P N Y M T S S M A L W M I A L Y V Q 7
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ICL1 K R M R ICL1ECL1 E W Y Y ECL1ICL2 P L Q P R L ICL2ECL2 T T E T M P S R V V C M I E W P E H ECL2ICL3 S S D ICL3ECL3 P D L Y L K K ECL3N-term M D N V L P V D S D L S P N I S T N T S E P N Q F V Q N-termC-term R C C P F I S A G D Y E G L E M K S T R Y L Q T Q G S V Y K V S R L E T T I S T V V G A H E E E P E D G P K A T P S S L D L T S N C S S R S D S K T M T E S F S F S S N V L S C-term P A W Q I V L W A A A Y T V I V V T S V V G N V V V M W I I L A H T V T N Y F L V N L A F A E A S M A A F N T V V N F T Y A V H N G L F Y C K F H N F F P I A A V F A S I Y S M T A V A F D R Y M A I I H S A T A T K V V I C V I W V L A L L L A F P Q G Y Y S P N K I Y E K V Y H I C V T V L I Y F L P L L V I G Y A Y T V V G I T L W A S E I P G D R Y H E Q V S A K R K V V K M M I V V V C T F A I C W L P F H I F F L L P Y I N F I Q Q V Y L A I M W L A M S S T M Y N P I I Y C C L N D R F K H F R L G A F
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Residue Table


GPCRdb(A)
GPCRdb(A)
NK1 receptor
TM3
3x32 3.32x32 P112
3x33 3.33x33 I113
TM4
4x61 4.60x61 Q165
TM5
5x40 5.39x40 H197
TM6
6x51 6.51x51 F264
6x55 6.55x55 F268