Structure information

ETB receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6K1Q

SPECIES

Homo sapiens

RESOLUTION

2.700

PREFERRED CHAIN

A

PUBLICATION DATE

July 17, 2019

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
IRL2500 H150 2.53x53 TM2 aromatic (face-to-face)
IRL2500 N158 2.61x60 TM2 polar (hydrogen bond)
IRL2500 V177 3.28x28 TM3 hydrophobic
IRL2500 P178 3.29x29 TM3 hydrophobic
IRL2500 Q181 3.32x32 TM3 polar (hydrogen bond)
IRL2500 Q181 3.32x32 TM3 polar (hydrogen bond)
IRL2500 K182 3.33x33 TM3 polar (charge-assisted hydrogen bond)
IRL2500 V185 3.36x36 TM3 hydrophobic
IRL2500 F240 4.64x65 TM4 aromatic (face-to-edge)
IRL2500 L277 5.42x43 TM5 hydrophobic
IRL2500 W336 6.48x48 TM6 aromatic (edge-to-face)
IRL2500 L339 6.51x51 TM6 hydrophobic
IRL2500 R343 6.55x55 TM6 polar (charge-charge)
IRL2500 R343 6.55x55 TM6 polar (charge-charge)
IRL2500 A375 7.42x41 TM7 hydrophobic

Ligands

IRL2500

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Residue Diagrams

S N G I I G L V F V L C S V V T N I Y K 1 A S L A L G D L L H I I V D I P I N V Y K 2 A C L S L V T I G V S A K Q I F P V L K 3 T A V E I V L I W V V S V V L A V P E 4 Y F F A T I A L P L C F Y F S F L W W D K 5 F C L V L V F A L C W L P L H L S R I L 6 I P N I C S N L S A M N I G I Y D L V 7
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ICL1 K C M R N ICL1ECL1 E D W P F ECL1ICL2 W S R I K G I G ICL2ECL2 D I I T M D Y K G S Y L R I C L L H P V Q K ECL2ICL3 Q I A L ICL3ECL3 N Q N D P N ECL3N-term M Q P P P S L C G R A L V A L V L A C G L S R I W G E E R G F P P D R A T P L L Q T A E I M T P P T K T L W P K G S N A S L A R S L A P A E V P K G D R T A G S P P R T I S P P P C N-termC-term W C Q S F E E K Q S L E E K Q S C L K F K A N D H G Y D N F R S S N K Y S S S C-term Q G P I E I K E T F K Y I N T V V S C L V F V L G I I G N S T L L R I I Y K N G P N I L I A S L A L G D L L H I V I D I P I N V Y K L L A G A E M C K L V P F I Q K A S V G I T V L S L C A L S I D R Y R A V A S V P K W T A V E I V L I W V V S V V L A V P E A I G F T A F M Q F Y K T A K D W W L F S F Y F C L P L A I T A F F Y T L M T C E M L R K K S G M N D H L K Q R R E V A K T V F C L V L V F A L C W L P L H L S R I L K L T L Y R C E L L S F L L V L D Y I G I N M A S L N S C I N P I A L Y L V S K R F K S F K N C C L C C
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Residue Table


GPCRdb(A)
GPCRdb(A)
ETB receptor
TM2
2x53 2.53x53 H150
2x60 2.61x60 N158
TM3
3x28 3.28x28 V177
3x29 3.29x29 P178
3x32 3.32x32 Q181
3x33 3.33x33 K182
3x36 3.36x36 V185
TM4
4x65 4.64x65 F240
TM5
5x43 5.42x43 L277
TM6
6x48 6.48x48 W336
6x51 6.51x51 L339
6x55 6.55x55 R343
TM7
7x41 7.42x41 A375