Structure information

PAC1 receptor

PROTEIN CLASS

Class B1 (Secretin)

PDB CODE

6M1H

SPECIES

Homo sapiens

RESOLUTION

3.600

PREFERRED CHAIN

A

PUBLICATION DATE

March 11, 2020

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
Maxadilan I61 N-term hydrophobic
Maxadilan L80 N-term hydrophobic
Maxadilan F84 N-term hydrophobic
Maxadilan Y130 N-term hydrophobic
Maxadilan F131 N-term hydrophobic
Maxadilan F136 N-term hydrophobic
Maxadilan D147 1.33x33 TM1 polar (charge-assisted hydrogen bond)
Maxadilan Y150 1.36x36 TM1 polar (hydrogen bond)
Maxadilan Y150 1.36x36 TM1 polar (hydrogen bond)
Maxadilan Y157 1.43x43 TM1 hydrophobic
Maxadilan Y211 2.72x72 TM2 hydrophobic
Maxadilan Q214 2.75x75 TM2 polar (hydrogen bond with backbone)
Maxadilan C219 ECL1 polar (hydrogen bond with backbone)
Maxadilan F220 ECL1 aromatic (face-to-edge)
Maxadilan Y241 3.44x44 TM3 polar (hydrogen bond)
Maxadilan M299 ECL2 hydrophobic
Maxadilan N300 ECL2 polar (hydrogen bond)
Maxadilan N300 ECL2 polar (hydrogen bond)
Maxadilan D301 ECL2 polar (charge-assisted hydrogen bond)
Maxadilan V313 5.43x43 TM5 hydrophobic
Maxadilan A370 6.57x57 TM6 hydrophobic
Maxadilan E374 ECL3 polar (charge-assisted hydrogen bond)
Maxadilan R379 ECL3 polar (charge-assisted hydrogen bond)
Maxadilan L382 7.39x38 TM7 hydrophobic
Maxadilan L386 7.43x42 TM7 hydrophobic

Ligands

Maxadilan

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

T L T V L S T S Y G V T Y L A K V S L Y 1 M N L F V S F M L R A I S V F I K D W I 2 I F L W F Y N S V V C Y H F F V M V A K 3 Y F Y W Y T I G I W G T P T V C V T V W A 4 F L V F N V M I S G V V P G K I V W W L A 5 L L L I P L F G I H Y T V F A F S 6 V A V V F G Q F S G L G L E F V L R E 7
Download: PNG | SVG
ICL1 R K L H ICL1ECL1 Y A E Q D S N H C F I S ECL1ICL2 T F F P E R ICL2ECL2 D T G C W D M N D ECL2ICL3 Q S P D M G G ICL3ECL3 P E N V S ECL3N-term M A G V V H V S L A A L L L L P M A P A M H S D C I F K K E Q A M C L E K I Q R A N E L M G F N D S S P G C P G M W D N I T C W K P A H V G E M V L V S C P E L F R I F N P D Q V W E T E T I G E S D F G D S N S L D L S D M G V V S R N C T E D G W S E P F P H Y F D A C G F D E N-termC-term H R H P S L A S S G V N G G T Q L S I L S K S S S Q I R M S G L P A D N L A T C-term Y E S E T G D Q D Y Y Y L S V K A L Y T V G Y S T S L V T L T T A M V I L C R F C T R N F I H M N L F V S F M L R A I S V F I K D W I L T V E C K A V M V F F H Y C V V S N Y F W L F I E G L Y L F T L L V E R Y F Y W Y T I I G W G T P T V C V T V W A T L R L Y F D S T A L W W V I K G P V V G S I M V N F V L F I G I I V I L V Q K L N E S S I Y L R L A R S T L L L I P L F G I H Y T V F A F S K R E R L V F E L G L G S F Q G F V V A V L Y C F L N G E I K R W K V A V D V Q A E K W R S N R Y F F K
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(B)
PAC1 receptor
TM1
1x29 1.33x33 D147
1x32 1.36x36 Y150
1x39 1.43x43 Y157
TM3
3x40 3.44x44 Y241
TM5
5x47 5.43x43 V313
TM6
6x52 6.57x57 A370
TM7
7x34 7.39x38 L382
7x38 7.43x42 L386