Structure information

FPR2/ALX

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6OMM

SPECIES

Homo sapiens

RESOLUTION

3.170

PREFERRED CHAIN

R

PUBLICATION DATE

Feb. 26, 2020

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
WKYMVX E89 ECL1 polar (charge-charge)
WKYMVX D106 3.33x33 TM3 polar (charge-assisted hydrogen bond)
WKYMVX F110 3.37x37 TM3 hydrophobic
WKYMVX L164 4.64x65 TM4 hydrophobic
WKYMVX F178 45.52x52 ECL2 aromatic (face-to-edge)
WKYMVX L198 5.35x36 TM5 hydrophobic
WKYMVX R201 5.38x39 TM5 polar (charge-assisted hydrogen bond)
WKYMVX R201 5.38x39 TM5 polar (charge-assisted hydrogen bond)
WKYMVX R201 5.38x39 TM5 polar (charge-assisted hydrogen bond)
WKYMVX R205 5.42x43 TM5 polar (charge-assisted hydrogen bond)
WKYMVX D281 7.32x31 TM7 polar (charge-assisted hydrogen bond)
WKYMVX V284 7.35x34 TM7 hydrophobic

Ligands

WKYMVX

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Residue Diagrams

G N G L V G L V F T V G L V V L P L I R 1 L N L A L A D F S F T A T L P F L I V S 2 F G I L F V S G F L N I D V V I H I L K 3 A M K V I V G P W I L A L V L T L P V 4 Y C I A V I S M P L S F G I V F R I I G R 5 T A V V A S F F I C W F P F Q L V A L L 6 M P N L C S N F F A L S S T P N V L I 7
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ICL1 T R ICL1ECL1 E K W P F ECL1ICL2 P V W A Q N H R ICL2ECL2 T T V T I P N G D T Y C T F N F A S W G G ECL2ICL3 M I K S ICL3ECL3 L K E M L F Y G K ECL3N-term M E T N F S T P L N E Y E E V S Y E N-termC-term P T S L E R A L S E D S A P T N D T A A N S A S P P A E T E L Q A M C-term S A G Y T V L R I L P L V V L G V T F V L G V L G N G L V I W V A G F R M T V T T I C Y L N L A L A D F S F T A T L P F L I V S M A M G G W F L C K L I H I V V D I N L F G S V F L I G F I A L D R C I C V L H T V S L A M K V I V G P W I L A L V L T L P V F L F L T P E E R L K V A I T M L T A R G I I R F V I G F S L P M S I V A I C Y G L I A A K I H K K G S R P L R V L T A V V A S F F I C W F P F Q L V A L L G T V W Y K I I D I L V N P T S S L A F F N S C L N P M L Y V F V G Q D L I H F R E R S L
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Residue Table


GPCRdb(A)
GPCRdb(A)
FPR2/ALX
TM3
3x33 3.33x33 D106
3x37 3.37x37 F110
TM4
4x65 4.64x65 L164
ECL2
45x52 45.52x52 F178
TM5
5x36 5.35x36 L198
5x39 5.38x39 R201
5x43 5.42x43 R205
TM7
7x31 7.32x31 D281
7x34 7.35x34 V284