Structure information

OX1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6TO7

SPECIES

Homo sapiens

RESOLUTION

2.260

PREFERRED CHAIN

A

PUBLICATION DATE

Jan. 1, 2020

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
Suvorexant I122 3.28x28 TM3 hydrophobic
Suvorexant P123 3.29x29 TM3 hydrophobic
Suvorexant F219 5.42x43 TM5 aromatic (edge-to-face)
Suvorexant I314 6.51x51 TM6 hydrophobic
Suvorexant N318 6.55x55 TM6 polar (hydrogen bond)
Suvorexant N318 6.55x55 TM6 polar (hydrogen bond)
Suvorexant N318 6.55x55 TM6 polar (hydrogen bond)
Suvorexant H344 7.39x38 TM7 aromatic (face-to-face)

Ligands

Suvorexant

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Residue Diagrams

T N G V L A V V F V A V Y A A I L V W E 1 V N L S L A D V L V T I A C L P A S L L V 2 F S L T L V A V S V S V A Q L Y P I V K 3 A R G S I L G I W A V S L A I M V P Q 4 Y A M A M L G L P A L Y T V I F F C S H Y 5 M V V L L V F A L C Y L P I S V L N V L 6 I P N A A S N A Y V L W H S F T F C A 7
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ICL1 H H M R ICL1ECL1 S W L F ECL1ICL2 P L L F K S ICL2ECL2 E C S S V L P E L A N R T R L F S V C D E R W A D D ECL2ICL3 G T T S A L V R N W K R P S D Q L G D L E Q G L S G E P Q P R A R A ICL3ECL3 G M F R Q A S D ECL3N-term M E P S A T P G A Q M G V P P G S R E P S P V P P D Y E D E F L R Y L W R D Y L Y P K Q Y N-termC-term G L G P C G S L K A P S P R S S A S H K S L S L Q S R C S I S K I S E H V V L T S V T T V L P C-term E W V L I A A Y V A V F V V A L V G N T L V C L A V W R N T V T N Y F I V N L S L A D V L V T A I C L P A S L L V D I T E G H A L C K V I P Y L Q A V S V S V A V L T L S F I A L D R W Y A I C H T A R R A R G S I L G I W A V S L A I M V P Q A A V M L Y P K I Y H S C F F I V T Y L A P L G L M A M A Y F Q I F R K L W G R Q I P F L A E V K Q M R A R R K T A K M L M V V L L V F A L C Y L P I S V L N V L K R V F R E A V Y A C F T F S H W L V Y A N S A A N P I I Y N F L S G K F K A C L P F R E Q A F S C
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Residue Table


GPCRdb(A)
GPCRdb(A)
OX1 receptor
TM3
3x28 3.28x28 I122
3x29 3.29x29 P123
TM5
5x43 5.42x43 F219
TM6
6x51 6.51x51 I314
6x55 6.55x55 N318
TM7
7x38 7.39x38 H344