Structure information

OT receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6TPK

SPECIES

Homo sapiens

RESOLUTION

3.200

PREFERRED CHAIN

A

PUBLICATION DATE

Aug. 5, 2020

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
retosiban K116 3.29x29 TM3 polar (charge-assisted hydrogen bond)
retosiban Q119 3.32x32 TM3 polar (hydrogen bond)
retosiban M123 3.36x36 TM3 hydrophobic
retosiban Q171 4.60x61 TM4 polar (hydrogen bond)
retosiban W288 6.48x48 TM6 hydrophobic
retosiban F291 6.51x51 TM6 hydrophobic
retosiban Q295 6.55x55 TM6 polar (hydrogen bond)

Ligands

retosiban

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

A N G S L A L L L I L C L V A V E V R A 1 K H L S I A D L V V A F V Q V L P Q L L W 2 L L L L Y T S A F M G V V Q L Y K V L R 3 D R L A V L A T W L G C L V A S A P Q 4 Y C A A L V I V P V I Y V A L T I W T I Y 5 F I I V L A F I V C W T P F F F V Q M W 6 W P N C C S N L S A L L M V I I F A S 7
Download: PNG | SVG
ICL1 R Q K H ICL1ECL1 R F Y G ECL1ICL2 P L R S L ICL2ECL2 S L R E V A D G V F D C W A V F I Q P ECL2ICL3 A A A E A P E G A A A G D G G R V A L A R V S S V ICL3ECL3 D A N A P ECL3N-term M E G A L A A N W S A E A A N A S A A P P G A E G N R T A G P P R R N-termC-term S Y L K G R R L G E T S A S K K S N S S S F V L S H R S S S Q R S C S Q P S T A C-term N E A L A R V E V A V L C L I L L L A L S G N A C V L L A L R T T S R L F F F M K H L S I A D L V V A V F Q V L P Q L L W D I T F P D L L C R L V K Y L Q V V G M F A S T Y L L L L M S L D R C L A I C Q R R R T D R L A V L A T W L G C L V A S A P Q V H I F W G P K A Y I T W I T L A V Y I V P V I V L A A C Y G L I S F K I W Q N L R L K T A A A K L I S K A K I R T V K M T F I I V L A F I V C W T P F F F V Q M W S V W K E A S A F I I V M L L A S L N S C C N P W I Y M L F T G H L V Q C S A L F H E R F L C
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
OT receptor
TM3
3x29 3.29x29 K116
3x32 3.32x32 Q119
3x36 3.36x36 M123
TM4
4x61 4.60x61 Q171
TM6
6x48 6.48x48 W288
6x51 6.51x51 F291
6x55 6.55x55 Q295