Structure information

β2-adrenoceptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

7DHI

SPECIES

Homo sapiens

RESOLUTION

3.260

PREFERRED CHAIN

R

REFERENCE

10.1093/NSR/NWAA284

PUBLICATION DATE

Dec. 16, 2020

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
levosalbutamol D113 3.32x32 TM3 polar (charge-assisted hydrogen bond)
levosalbutamol V114 3.33x33 TM3 hydrophobic
levosalbutamol V114 3.33x33 TM3 Van der Waals
levosalbutamol V117 3.36x36 TM3 Van der Waals
levosalbutamol V117 3.36x36 TM3 hydrophobic
levosalbutamol F193 45.52x52 ECL2 Van der Waals
levosalbutamol F193 45.52x52 ECL2 hydrophobic
levosalbutamol S203 5.42x43 TM5 polar (hydrogen bond)
levosalbutamol S203 5.42x43 TM5 polar (hydrogen bond with backbone)
levosalbutamol S203 5.42x43 TM5 Van der Waals
levosalbutamol S207 5.46x461 TM5 polar (hydrogen bond)
levosalbutamol S207 5.46x461 TM5 Van der Waals
levosalbutamol F289 6.51x51 TM6 aromatic (edge-to-face)
levosalbutamol F289 6.51x51 TM6 Van der Waals
levosalbutamol F290 6.52x52 TM6 Van der Waals
levosalbutamol F290 6.52x52 TM6 aromatic (edge-to-face)
levosalbutamol N312 7.39x38 TM7 polar (hydrogen bond)
levosalbutamol Y316 7.43x42 TM7 Van der Waals

Ligands

levosalbutamol

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Residue Diagrams

V N G F V I A L V I L S M V I G M G V V 1 T S L A C A D L V M G A L V V P F G A A H 2 V C L T E I S A T V C L V D I S T W F E 3 A R V I I L M V W I V S G L T S F L P I 4 Y V F V M I V L P V Y F S V I S S A I A Y 5 G I I M G T F T L C W L P F F I V N I V 6 L P N F G S N V Y G I W N L L I Y V E 7
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ICL1 E R L Q ICL1ECL1 M W T F ECL1ICL2 P F K Y Q S L L ICL2ECL2 W Y R A T H Q E A I N C Y A N E T C C D F F T ECL2ICL3 G R F H V Q N L S Q V E Q D G R T G H G L R R S ICL3ECL3 D N L I ECL3N-term M G Q P G N G S A F L L A P N G S H A P D H D V T N-termC-term L R R S S L K A Y G N G Y S S N G N T G E Q S G Y H V E Q E K E N K L L C E D L P G T E D F V G H Q G T V P S D N I D S Q G R N C S T N D S L L C-term Q E R D E V W V V G M G I V M S L I V L A I V F G N V L V I T A I A K F T V T N Y F I T S L A C A D L V M G L A V V P F G A A H I L M K G N F W C E F W T S I D V L C V T A S I E T L C V I A V D R Y F A I T S T K N K A R V I I L M V W I V S G L T S F L P I Q M H N Q A Y A I A S S I V S F Y V P L V I M V F V Y S R V F Q E A K R Q L Q K I D K S E S K F C L K E H K A L K T L G I I M G T F T L C W L P F F I V N I V H V I Q R K E V Y I L L N W I G Y V N S G F N P L I Y C R S P D F Q E F R I A L L C
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Residue Table


GPCRdb(A)
GPCRdb(A)
β2-adrenoceptor
TM3
3x32 3.32x32 D113
3x33 3.33x33 V114
3x36 3.36x36 V117
ECL2
45x52 45.52x52 F193
TM5
5x43 5.42x43 S203
5x461 5.46x461 S207
TM6
6x51 6.51x51 F289
6x52 6.52x52 F290
TM7
7x38 7.39x38 N312
7x42 7.43x42 Y316