PDB
7DHR
Resolution
3.8 Å
Released
Dec. 16, 2020
Receptor
β2
Class
A
Species
Homo sapiens
Ligand
LEVISOPRENALINE
Function
Agonist
Reference
10.1093/NSR/NWAA284

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Ligand Amino Acid Generic Number Segment Interaction Type
LEVISOPRENALINE D113 3.32x32 TM3 polar (charge-assisted hydrogen bond)
LEVISOPRENALINE V117 3.36x36 TM3 hydrophobic
LEVISOPRENALINE V117 3.36x36 TM3 Van der Waals
LEVISOPRENALINE F193 45.52x52 ECL2 Van der Waals
LEVISOPRENALINE F193 45.52x52 ECL2 hydrophobic
LEVISOPRENALINE S203 5.42x43 TM5 Van der Waals
LEVISOPRENALINE S207 5.46x461 TM5 polar (hydrogen bond)
LEVISOPRENALINE S207 5.46x461 TM5 Van der Waals
LEVISOPRENALINE F290 6.52x52 TM6 aromatic (edge-to-face)
LEVISOPRENALINE F290 6.52x52 TM6 Van der Waals
LEVISOPRENALINE N312 7.39x38 TM7 polar (hydrogen bond)
LEVISOPRENALINE N312 7.39x38 TM7 Van der Waals

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Snake plot — Download: PNG | SVG
ICL1 E R L Q ICL1ECL1 M W T F ECL1ICL2 P F K Y Q S L L ICL2ECL2 W Y R A T H Q E A I N C Y A N E T C C D F F T ECL2ICL3 G R F H V Q N L S Q V E Q D G R T G H G L R R S ICL3ECL3 D N L I ECL3N-term M G Q P G N G S A F L L A P N G S H A P D H D V T N-termC-term L R R S S L K A Y G N G Y S S N G N T G E Q S G Y H V E Q E K E N K L L C E D L P G T E D F V G H Q G T V P S D N I D S Q G R N C S T N D S L L C-term Q E R D E V W V V G M G I V M S L I V L A I V F G N V L V I T A I A K F T V T N Y F I T S L A C A D L V M G L A V V P F G A A H I L M K G N F W C E F W T S I D V L C V T A S I E T L C V I A V D R Y F A I T S T K N K A R V I I L M V W I V S G L T S F L P I Q M H N Q A Y A I A S S I V S F Y V P L V I M V F V Y S R V F Q E A K R Q L Q K I D K S E S K F C L K E H K A L K T L G I I M G T F T L C W L P F F I V N I V H V I Q R K E V Y I L L N W I G Y V N S G F N P L I Y C R S P D F Q E F R I A L L C
Helix box plot — Download: PNG | SVG V N G F V I A L V I L S M V I G M G V V 1 T S L A C A D L V M G A L V V P F G A A H 2 V C L T E I S A T V C L V D I S T W F E 3 A R V I I L M V W I V S G L T S F L P I 4 Y V F V M I V L P V Y F S V I S S A I A Y 5 G I I M G T F T L C W L P F F I V N I V 6 L P N F G S N V Y G I W N L L I Y V E 7

GPCRdb(A)
GPCRdb(A)
β2-adrenoceptor
TM3
3x32 3.32x32 D113
3x36 3.36x36 V117
ECL2
45x52 45.52x52 F193
TM5
5x43 5.42x43 S203
5x461 5.46x461 S207
TM6
6x52 6.52x52 F290
TM7
7x38 7.39x38 N312