Structure information

TA1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8JLK

SPECIES

Mus musculus

RESOLUTION

3.220

PREFERRED CHAIN

R

REFERENCE

10.1038/S41586-023-06804-Z

PUBLICATION DATE

Nov. 15, 2023

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
ulotaront D102 3.32x32 TM3 polar (charge-assisted hydrogen bond)
ulotaront I103 3.33x33 TM3 hydrophobic
ulotaront I103 3.33x33 TM3 Van der Waals
ulotaront S106 3.36x36 TM3 Van der Waals
ulotaront F185 ECL2 hydrophobic
ulotaront F185 ECL2 Van der Waals
ulotaront W261 6.48x48 TM6 hydrophobic
ulotaront F264 6.51x51 TM6 Van der Waals
ulotaront F264 6.51x51 TM6 aromatic (edge-to-face)
ulotaront F265 6.52x52 TM6 hydrophobic
ulotaront F265 6.52x52 TM6 Van der Waals
ulotaront Y287 7.39x38 TM7 Van der Waals
ulotaront Y291 7.43x42 TM7 Van der Waals
ulotaront Y291 7.43x42 TM7 hydrophobic

Ligands

ulotaront

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

L N G V L T A L I I L S M L S Y L S A Q 1 H S M A I V D F L L G L C I M P C S M V R 2 F A L H F I S A S S L M I D T S T H V K 3 I L V M I L V S W S L P A V Y A F G M I 4 Y V F L M V S G P I Y F S T M F A L V G S 5 G I M V G V F L V C W C P F F L C T V L 6 M P N L A S N L Y G F W Y L A D N L S 7
Download: PNG | SVG
ICL1 K Q L H ICL1ECL1 C W Y F ECL1ICL2 P L R Y K A K I ICL2ECL2 L N L K G V E E L Y R S Q V S D L G G C S P F F ECL2ICL3 L E G K S Q ICL3ECL3 Y V I ECL3N-term M H L C H A I T N I S H R N S D W S R E N-termC-term G K I F Q K D S S R S K L F L C-term V Q A S L Y S L M S L I I L A T L V G N L I V I I S I S H F T P T N W L L H S M A I V D F L L G C L I M P C S M V R T V E R G E I L C K V H T S T D I M L S S A S I F H L A F I S I D R Y C A V C D N I S T I L V M I L V S W S L P A V Y A F G M I F L E S K V S G V L A F M T S F Y I P G S V M L F V Y Y R I Y F I A K G Q A R S I N R T N V Q V G A P Q S K E T K A A K T L G I M V G V F L V C W C P F F L C T V L D P F L G P P S L N D A L Y W F G Y L N S A L N P M V Y A F F Y P W L K M F R R A V L L
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
TA1 receptor
TM3
3x32 3.32x32 D102
3x33 3.33x33 I103
3x36 3.36x36 S106
TM6
6x48 6.48x48 W261
6x51 6.51x51 F264
6x52 6.52x52 F265
TM7
7x38 7.39x38 Y287
7x42 7.43x42 Y291