PDB
9YDV
Resolution
3.1 Å
Released
Nov. 19, 2025
Receptor
P2Y14
Class
A
Species
Homo sapiens
Ligand
Function
CHEMBL1198696
Agonist
Reference
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Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL1198696 C94 3.25x25 TM3 Van der Waals
CHEMBL1198696 A98 3.29x29 TM3 Van der Waals
CHEMBL1198696 V99 3.30x30 TM3 Van der Waals
CHEMBL1198696 Y102 3.33x33 TM3 aromatic (face-to-face)
CHEMBL1198696 Y102 3.33x33 TM3 hydrophobic
CHEMBL1198696 A153 4.57x57 TM4 Van der Waals
CHEMBL1198696 N156 4.60x60 TM4 Van der Waals
CHEMBL1198696 C172 45.50x50 ECL2 Van der Waals
CHEMBL1198696 H184 5.36x36 TM5 polar (hydrogen bond)
CHEMBL1198696 N188 5.40x40 TM5 Van der Waals
CHEMBL1198696 F191 5.43x43 TM5 Van der Waals
CHEMBL1198696 R253 6.55x55 TM6 polar (charge-charge)
CHEMBL1198696 Y256 6.58x58 TM6 polar (hydrogen bond)
CHEMBL1198696 Q260 6.62x62 TM6 Van der Waals
CHEMBL1198696 R274 7.32x31 TM7 polar (charge-charge)
CHEMBL1198696 K277 7.35x34 TM7 polar (charge-charge)

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ICL1 P S S ICL1ECL1 L G P ECL1ICL2 P L W T S F I Q ICL2ECL2 N Q S V R E V T Q I K C I E L K S ECL2ICL3 L K S ICL3ECL3 A H Y ECL3N-term M I N S T S T Q P P D E S C S Q N N-termC-term L H I P L K A Q N D L D I S R I K R G N T T L E S T D T L C-term L L I T Q Q I I P V L Y C M V F I A G I L L N G V S G W I F F Y V K S F I I Y L K N I V I A D F V M S L T F P F K I L G D S G W Q L N V F V C R V S A V L F Y V N M Y V S I V F F G L I S F D R Y Y K I V K S V S Y S K L L S V I V W M L M L L L A V P N I I L T E L G R K W H K A S N Y I F V A I F W I V F L L L I V F Y T A I T K K I F K S H S R N S T S V K K K S S R N I F S I V F V F F V C F V P Y H I A R I P Y T K S Q T E S C Q S K E I L R Y M K E F T L L L S A A N V C L D P I I Y F F L C Q P L C K F R E I K
Helix box plot — Download: PNG | SVG G N L L I G A I F V M C Y L V P I I Q Q 1 K N I V I A D F V M S L T F P F K I L G 2 L G F F V I S V Y M N V Y F L V A S V R 3 S K L L S V I V W M L M L L L A V P N I 4 Y F V I L L L F V I W F I A V F I Y N S 5 I F S I V F V F V F C F V P Y H I A R I P 6 I P D L C V N A A S L L L T F E K M Y 7

GPCRdb(A)
GPCRdb(A)
P2Y14 receptor
TM3
3x25 3.25x25 C94
3x29 3.29x29 A98
3x30 3.30x30 V99
3x33 3.33x33 Y102
TM4
4x57 4.57x57 A153
4x60 4.60x60 N156
ECL2
45x50 45.50x50 C172
TM5
5x36 5.36x36 H184
5x40 5.40x40 N188
5x43 5.43x43 F191
TM6
6x55 6.55x55 R253
6x58 6.58x58 Y256
6x62 6.62x62 Q260
TM7
7x31 7.32x31 R274
7x34 7.35x34 K277