SST2 receptor - Gi1

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gi/o

G PROTEIN SPECIES

Homo sapiens

PDB CODE

7XMR

RESOLUTION

3.1 Å

REFERENCE

10.1038/S41422-022-00679-X

PUBLICATION DATE

Aug. 3, 2022

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

64 interactions (Click to see)

LIGANDS

SOMATOSTATIN - Agonist chembl_ligand pubchem

PHYSIOLOGICAL LIGANDS

cortistatin-14, SRIF-14, CST-17, SRIF-28



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic TM2 T 78 2x39 G.H5 D 350 G.H5.22
Van-der-waals TM2 T 78 2x39 G.H5 D 350 G.H5.22
Hydrophobic TM6 S 250 6x29 G.H5 F 354 G.H5.26
Hydrophobic ICL2 P 147 - G.H5 I 344 G.H5.16
Hydrophobic ICL2 I 148 - G.H5 F 336 G.H5.08
Hydrophobic ICL2 P 147 - G.H5 I 343 G.H5.15
Van-der-waals ICL2 P 147 - G.H5 I 343 G.H5.15
Polar H8 N 318 8x49 G.H5 D 350 G.H5.22
Hydrophobic H8 N 318 8x49 G.H5 D 350 G.H5.22
Van-der-waals H8 N 318 8x49 G.H5 D 350 G.H5.22
Hydrophobic TM5 V 242 5x72 G.S6 Y 320 G.S6.02
Van-der-waals TM5 V 242 5x72 G.S6 Y 320 G.S6.02
Hydrophobic ICL4 S 316 - G.H5 G 352 G.H5.24
Hydrophobic TM3 V 144 3x54 G.H5 L 348 G.H5.20
Van-der-waals TM3 V 144 3x54 G.H5 L 348 G.H5.20
Hydrophobic ICL3 S 244 - G.S6 Y 320 G.S6.02
Polar TM3 A 143 3x53 G.H5 N 347 G.H5.19
Hydrophobic TM3 A 143 3x53 G.H5 N 347 G.H5.19
Van-der-waals TM3 A 143 3x53 G.H5 N 347 G.H5.19
Polar ICL2 K 152 - G.hns1 R 32 G.hns1.03
Hydrophobic ICL2 K 152 - G.hns1 R 32 G.hns1.03
Van-der-waals ICL2 K 152 - G.hns1 R 32 G.hns1.03
Polar ICL2 A 151 - G.hns1 R 32 G.hns1.03
Hydrophobic ICL2 A 151 - G.hns1 R 32 G.hns1.03
Van-der-waals ICL2 A 151 - G.hns1 R 32 G.hns1.03
Polar H8 N 318 8x49 G.H5 K 349 G.H5.21
Hydrophobic ICL2 I 148 - G.s2s3 D 193 G.s2s3.02
Van-der-waals ICL2 I 148 - G.s2s3 D 193 G.s2s3.02
Polar ICL3 K 246 - G.h4s6 K 314 G.h4s6.08
Hydrophobic ICL3 K 246 - G.h4s6 K 314 G.h4s6.08
Van-der-waals ICL3 K 246 - G.h4s6 K 314 G.h4s6.08
Polar TM5 S 238 5x68 G.H5 D 341 G.H5.13
Van-der-waals TM5 S 238 5x68 G.H5 D 341 G.H5.13
Hydrophobic TM3 R 140 3x50 G.H5 L 353 G.H5.25
Van-der-waals TM3 R 140 3x50 G.H5 L 353 G.H5.25
Hydrophobic TM6 V 254 6x33 G.H5 L 353 G.H5.25
Hydrophobic ICL2 I 148 - G.S3 L 194 G.S3.01
Van-der-waals ICL2 I 148 - G.S3 L 194 G.S3.01
Hydrophobic TM3 V 144 3x54 G.H5 I 344 G.H5.16
Van-der-waals TM3 V 144 3x54 G.H5 I 344 G.H5.16
Polar TM3 R 140 3x50 G.H5 C 351 G.H5.23
Hydrophobic TM3 R 140 3x50 G.H5 C 351 G.H5.23
Van-der-waals TM3 R 140 3x50 G.H5 C 351 G.H5.23
Hydrophobic ICL2 I 148 - G.H5 I 343 G.H5.15
Polar TM6 K 253 6x32 G.H5 F 354 G.H5.26
Aromatic TM6 K 253 6x32 G.H5 F 354 G.H5.26
Hydrophobic TM6 K 253 6x32 G.H5 F 354 G.H5.26
Van-der-waals TM6 K 253 6x32 G.H5 F 354 G.H5.26
Polar ICL3 S 244 - G.S6 I 319 G.S6.01
Hydrophobic TM2 T 78 2x39 G.H5 C 351 G.H5.23
Hydrophobic TM5 V 242 5x72 G.H5 A 338 G.H5.10
Hydrophobic TM6 M 257 6x36 G.H5 L 353 G.H5.25
Polar ICL3 S 244 - G.h4s6 E 318 G.h4s6.12
Hydrophobic ICL3 S 244 - G.h4s6 E 318 G.h4s6.12
Van-der-waals ICL3 S 244 - G.h4s6 E 318 G.h4s6.12
Polar ICL3 K 246 - G.h4s6 K 317 G.h4s6.11
Van-der-waals ICL3 K 246 - G.h4s6 K 317 G.h4s6.11
Polar TM6 S 250 6x29 G.H5 K 345 G.H5.17
Van-der-waals TM6 S 250 6x29 G.H5 K 345 G.H5.17
Hydrophobic TM5 V 235 5x65 G.H5 L 348 G.H5.20
Hydrophobic TM5 I 231 5x61 G.H5 L 353 G.H5.25
Hydrophobic TM5 S 238 5x68 G.H5 I 344 G.H5.16
Hydrophobic ICL3 K 246 - G.h4s6 E 318 G.h4s6.12
Van-der-waals ICL3 K 246 - G.h4s6 E 318 G.h4s6.12
Hydrophobic TM6 V 254 6x33 G.H5 L 348 G.H5.20
Van-der-waals TM6 V 254 6x33 G.H5 L 348 G.H5.20
Hydrophobic ICL2 P 147 - G.H5 T 340 G.H5.12
Polar ICL3 K 246 - G.h4s6 D 315 G.h4s6.09
Hydrophobic ICL3 K 246 - G.h4s6 D 315 G.h4s6.09
Van-der-waals ICL3 K 246 - G.h4s6 D 315 G.h4s6.09
Hydrophobic TM5 V 242 5x72 G.H5 D 341 G.H5.13
Hydrophobic TM6 K 253 6x32 G.H5 L 353 G.H5.25
Van-der-waals TM6 K 253 6x32 G.H5 L 353 G.H5.25