SST2 receptor - Gi1

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

E

G PROTEIN (FAMILY)

Gi/o

G PROTEIN SPECIES

Homo sapiens

PDB CODE

7YAE

RESOLUTION

3.4 Å

REFERENCE

10.1038/S41467-023-36673-Z

PUBLICATION DATE

April 19, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

52 interactions (Click to see)

LIGANDS

Octreotide - Agonist

PHYSIOLOGICAL LIGANDS

cortistatin-14, SRIF-14, CST-17, SRIF-28



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic ICL2 K 152 - G.hns1 R 32 G.hns1.03
Hydrophobic TM5 S 238 5x68 G.H5 I 344 G.H5.16
Hydrophobic ICL2 I 148 - G.H5 F 336 G.H5.08
Van-der-waals ICL2 I 148 - G.H5 F 336 G.H5.08
Hydrophobic TM6 R 247 6x26 G.H5 K 345 G.H5.17
Hydrophobic TM3 V 144 3x54 G.H5 I 344 G.H5.16
Hydrophobic TM3 A 143 3x53 G.H5 C 351 G.H5.23
Polar TM3 A 143 3x53 G.H5 N 347 G.H5.19
Hydrophobic TM3 A 143 3x53 G.H5 N 347 G.H5.19
Van-der-waals TM3 A 143 3x53 G.H5 N 347 G.H5.19
Hydrophobic ICL2 I 148 - G.S3 L 194 G.S3.01
Hydrophobic TM2 T 76 2x37 G.H5 D 350 G.H5.22
Van-der-waals TM2 T 76 2x37 G.H5 D 350 G.H5.22
Hydrophobic ICL2 P 147 - G.H5 I 343 G.H5.15
Van-der-waals ICL2 P 147 - G.H5 I 343 G.H5.15
Hydrophobic ICL2 P 147 - G.H5 T 340 G.H5.12
Polar TM3 R 140 3x50 G.H5 C 351 G.H5.23
Hydrophobic TM3 R 140 3x50 G.H5 C 351 G.H5.23
Van-der-waals TM3 R 140 3x50 G.H5 C 351 G.H5.23
Polar H8 S 316 8x47 G.H5 D 350 G.H5.22
Hydrophobic TM6 S 250 6x29 G.H5 F 354 G.H5.26
Hydrophobic TM6 V 254 6x33 G.H5 L 353 G.H5.25
Hydrophobic TM3 V 144 3x54 G.H5 L 348 G.H5.20
Van-der-waals TM3 V 144 3x54 G.H5 L 348 G.H5.20
Ionic TM6 R 247 6x26 G.H5 D 341 G.H5.13
Polar TM6 R 247 6x26 G.H5 D 341 G.H5.13
Hydrophobic TM6 R 247 6x26 G.H5 D 341 G.H5.13
Van-der-waals TM6 R 247 6x26 G.H5 D 341 G.H5.13
Hydrophobic TM5 I 231 5x61 G.H5 L 353 G.H5.25
Hydrophobic ICL3 V 242 - G.H5 F 334 G.H5.06
Van-der-waals ICL3 V 242 - G.H5 F 334 G.H5.06
Hydrophobic ICL2 P 147 - G.H5 I 344 G.H5.16
Van-der-waals ICL2 P 147 - G.H5 I 344 G.H5.16
Hydrophobic ICL4 L 315 - G.H5 G 352 G.H5.24
Van-der-waals ICL4 L 315 - G.H5 G 352 G.H5.24
Polar TM5 S 238 5x68 G.H5 D 341 G.H5.13
Hydrophobic TM6 V 254 6x33 G.H5 F 354 G.H5.26
Van-der-waals TM6 V 254 6x33 G.H5 F 354 G.H5.26
Polar ICL3 S 245 - G.H4 E 308 G.H4.16
Van-der-waals ICL3 S 245 - G.H4 E 308 G.H4.16
Ionic ICL3 R 241 - G.H5 D 337 G.H5.09
Polar ICL3 R 241 - G.H5 D 337 G.H5.09
Hydrophobic ICL3 R 241 - G.H5 D 337 G.H5.09
Van-der-waals ICL3 R 241 - G.H5 D 337 G.H5.09
Hydrophobic TM3 R 140 3x50 G.H5 L 353 G.H5.25
Van-der-waals TM3 R 140 3x50 G.H5 L 353 G.H5.25
Hydrophobic TM5 V 235 5x65 G.H5 L 348 G.H5.20
Van-der-waals TM5 V 235 5x65 G.H5 L 348 G.H5.20
Hydrophobic ICL3 V 242 - G.S6 Y 320 G.S6.02
Van-der-waals ICL3 V 242 - G.S6 Y 320 G.S6.02
Hydrophobic H8 S 316 8x47 G.H5 G 352 G.H5.24
Ionic ICL2 R 155 - G.HN E 28 G.HN.52
Polar ICL2 R 155 - G.HN E 28 G.HN.52
Hydrophobic ICL2 R 155 - G.HN E 28 G.HN.52
Van-der-waals ICL2 R 155 - G.HN E 28 G.HN.52