Structure information

A2A receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

5K2B

SPECIES

Homo sapiens

RESOLUTION

2.500

PREFERRED CHAIN

A

REFERENCE

PUBLICATION DATE

Sept. 21, 2016

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
ZM-241385 F168 45.52x52 ECL2 aromatic (face-to-face)
ZM-241385 E169 ECL2 polar (charge-assisted hydrogen bond)
ZM-241385 W246 6.48x48 TM6 Van der Waals
ZM-241385 W246 6.48x48 TM6 hydrophobic
ZM-241385 L249 6.51x51 TM6 Van der Waals
ZM-241385 L249 6.51x51 TM6 hydrophobic
ZM-241385 H250 6.52x52 TM6 Van der Waals
ZM-241385 H250 6.52x52 TM6 aromatic (face-to-edge)
ZM-241385 N253 6.55x55 TM6 polar (hydrogen bond)
ZM-241385 N253 6.55x55 TM6 polar (hydrogen bond)
ZM-241385 H264 ECL3 Van der Waals
ZM-241385 L267 7.32x31 TM7 Van der Waals
ZM-241385 L267 7.32x31 TM7 hydrophobic
ZM-241385 M270 7.35x34 TM7 hydrophobic
ZM-241385 M270 7.35x34 TM7 Van der Waals
ZM-241385 I274 7.39x38 TM7 Van der Waals

Ligands

ZM-241385

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

V N G L I A L V A I A L E V T I Y V S S 1 V S L A A A D I A V G L V A I P F A I T I 2 A L L S F I S S Q T L V L V F C A I F L 3 A K G I I A I C W V L S F A I G L T P M 4 Y V G L M L L L P V L V C A F F N F Y V M Y 5 A I I V G L F A L C W L P L H I I N C F 6 F P N V V S N T H S L V I A L Y M L W 7
Download: PNG | SVG
ICL1 S N L Q ICL1ECL1 F C A ECL1ICL2 P L R Y N G L V ICL2ECL2 W N N C G Q P K E G K N H S Q G C G E G Q V A C L F E D V V ECL2ICL3 Q P L P G ICL3ECL3 P D C S H A ECL3C-term K A A G T S A R V L A A H G S D G E Q V S L R L N G H P P G V W A N G S A P H P E R R P N G Y A L G L V S G G S A Q E S Q G N T G L P D V E L L S H E L K G V C P E P P G L D D P L A Q D G A G V S C-term M P I M G S S V Y I T V E L A I A V L A I L G N V L V C W A V W L N N V T N Y F V V S L A A A D I A V G V L A I P F A I T I S T G A C H G C L F I A C F V L V L T Q S S I F S L L A I A I D R Y I A I R I T G T R A K G I I A I C W V L S F A I G L T P M L G P M N Y M V Y F N F F A C V L V P L L L M L G V Y L R I F L A A R R Q L K Q M E S E R A R S T L Q K E V H A A K S L A I I V G L F A L C W L P L H I I N C F T F F C P L W L M Y L A I V L S H T N S V V N P F I Y A Y R I R E F R K H V L P F F R Q T I I R S R Q Q E
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
A2A receptor
ECL2
45x52 45.52x52 F168
TM6
6x48 6.48x48 W246
6x51 6.51x51 L249
6x52 6.52x52 H250
6x55 6.55x55 N253
TM7
7x31 7.32x31 L267
7x34 7.35x34 M270
7x38 7.39x38 I274