G13 - TAS2R1 complex model

GPCR CLASS (FAMILY)

T2 (Taste 2)

SPECIES

Homo sapiens

G PROTEIN FAMILY

G12/13

DATE

2023-09-15

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.


Tertiary structure confidence

(pLDDT score) avg.: 76.2

Very high (>90)
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered

PTM Score: 0.5
iPTM Score: 0.2
PAE mean: 25.6


GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Polar TM6 A 222 6x30 G.H5 H 368 G.H5.17
Hydrophobic TM6 A 222 6x30 G.H5 H 368 G.H5.17
Van-der-waals TM6 A 222 6x30 G.H5 H 368 G.H5.17
Polar TM3 K 106 3x53 G.hns1 K 46 G.hns1.02
Hydrophobic TM3 Y 103 3x50 G.H5 L 374 G.H5.23
Hydrophobic TM5 H 204 5x68 G.H5 L 367 G.H5.16
Van-der-waals TM5 H 204 5x68 G.H5 L 367 G.H5.16
Polar TM4 R 121 4x37 G.HN T 43 G.HN.52
Hydrophobic TM4 R 121 4x37 G.HN T 43 G.HN.52
Van-der-waals TM4 R 121 4x37 G.HN T 43 G.HN.52
Polar TM3 Y 103 3x50 G.H5 M 375 G.H5.24
Hydrophobic TM3 Y 103 3x50 G.H5 M 375 G.H5.24
Van-der-waals TM3 Y 103 3x50 G.H5 M 375 G.H5.24
Hydrophobic TM2 L 44 2x39 G.H5 L 376 G.H5.25
Van-der-waals TM2 L 44 2x39 G.H5 L 376 G.H5.25
Hydrophobic TM5 V 212 5x76 G.H5 D 361 G.H5.10
Van-der-waals TM5 V 212 5x76 G.H5 D 361 G.H5.10
Polar ICL2 I 116 34x51 G.hns1 R 47 G.hns1.03
Hydrophobic ICL2 I 116 34x51 G.hns1 R 47 G.hns1.03
Van-der-waals ICL2 I 116 34x51 G.hns1 R 47 G.hns1.03
Hydrophobic TM4 K 124 4x40 G.HN K 42 G.HN.51
Van-der-waals TM4 K 124 4x40 G.HN K 42 G.HN.51
Hydrophobic ICL2 K 119 34x54 G.hns1 K 46 G.hns1.02
Van-der-waals ICL2 K 119 34x54 G.hns1 K 46 G.hns1.02
Hydrophobic TM5 M 208 5x72 G.H5 D 364 G.H5.13
Van-der-waals TM5 M 208 5x72 G.H5 D 364 G.H5.13
Hydrophobic TM4 S 123 4x39 G.hns1 K 46 G.hns1.02
Van-der-waals TM4 S 123 4x39 G.hns1 K 46 G.hns1.02
Hydrophobic TM5 L 201 5x65 G.H5 L 371 G.H5.20
Polar TM5 T 211 5x75 G.H5 R 360 G.H5.09
Hydrophobic TM5 T 211 5x75 G.H5 R 360 G.H5.09
Van-der-waals TM5 T 211 5x75 G.H5 R 360 G.H5.09
Polar ICL2 R 111 34x46 G.s2s3 N 215 G.s2s3.02
Hydrophobic ICL2 R 111 34x46 G.s2s3 N 215 G.s2s3.02
Van-der-waals ICL2 R 111 34x46 G.s2s3 N 215 G.s2s3.02
Hydrophobic TM3 K 106 3x53 G.H5 L 374 G.H5.23
Van-der-waals TM3 K 106 3x53 G.H5 L 374 G.H5.23
Hydrophobic TM6 A 226 6x34 G.H5 L 371 G.H5.20
Hydrophobic TM4 K 124 4x40 G.hns1 K 46 G.hns1.02
Van-der-waals TM4 K 124 4x40 G.hns1 K 46 G.hns1.02
Ionic TM5 H 204 5x68 G.H5 D 364 G.H5.13
Polar TM5 H 204 5x68 G.H5 D 364 G.H5.13
Hydrophobic TM5 H 204 5x68 G.H5 D 364 G.H5.13
Van-der-waals TM5 H 204 5x68 G.H5 D 364 G.H5.13
Polar ICL2 R 111 34x46 G.s2s3 K 214 G.s2s3.01
Hydrophobic ICL2 R 111 34x46 G.s2s3 K 214 G.s2s3.01
Van-der-waals ICL2 R 111 34x46 G.s2s3 K 214 G.s2s3.01
Hydrophobic ICL2 M 120 34x55 G.HN K 42 G.HN.51
Van-der-waals ICL2 M 120 34x55 G.HN K 42 G.HN.51
Van-der-waals TM2 P 43 2x38 G.H5 Q 377 G.H5.26
Hydrophobic ICL2 W 117 34x52 G.HN T 43 G.HN.52
Van-der-waals ICL2 W 117 34x52 G.HN T 43 G.HN.52
Hydrophobic TM3 V 107 3x54 G.H5 M 375 G.H5.24
Hydrophobic TM6 A 226 6x34 G.H5 H 368 G.H5.17
Hydrophobic H8 P 282 8x48 G.H5 L 376 G.H5.25
Van-der-waals H8 P 282 8x48 G.H5 L 376 G.H5.25
Hydrophobic TM5 M 208 5x72 G.H5 D 361 G.H5.10
Van-der-waals TM5 M 208 5x72 G.H5 D 361 G.H5.10
Polar TM4 R 121 4x37 G.HN S 39 G.HN.48
Hydrophobic TM4 R 121 4x37 G.HN S 39 G.HN.48
Van-der-waals TM4 R 121 4x37 G.HN S 39 G.HN.48
Polar ICL2 V 110 34x45 G.hns1 R 47 G.hns1.03
Van-der-waals ICL2 V 110 34x45 G.hns1 R 47 G.hns1.03
Hydrophobic ICL2 K 119 34x54 G.hns1 R 47 G.hns1.03
Van-der-waals ICL2 K 119 34x54 G.hns1 R 47 G.hns1.03
Hydrophobic ICL2 M 120 34x55 G.HN Y 44 G.HN.53
Van-der-waals ICL2 M 120 34x55 G.HN Y 44 G.HN.53
Polar TM6 P 223 6x31 G.H5 H 368 G.H5.17
Hydrophobic TM6 P 223 6x31 G.H5 H 368 G.H5.17
Van-der-waals TM6 P 223 6x31 G.H5 H 368 G.H5.17
Hydrophobic TM6 A 222 6x30 G.H5 K 372 G.H5.21
Hydrophobic TM2 A 42 2x37 G.H5 Q 377 G.H5.26
Van-der-waals TM2 A 42 2x37 G.H5 Q 377 G.H5.26
Hydrophobic ICL2 S 109 34x44 G.S3 V 216 G.S3.01
Van-der-waals ICL2 S 109 34x44 G.S3 V 216 G.S3.01
Polar TM5 Q 207 5x71 G.s2s3 K 214 G.s2s3.01
Hydrophobic TM5 Q 207 5x71 G.s2s3 K 214 G.s2s3.01
Van-der-waals TM5 Q 207 5x71 G.s2s3 K 214 G.s2s3.01
Polar TM4 R 121 4x37 G.hns1 K 46 G.hns1.02
Hydrophobic TM4 R 121 4x37 G.hns1 K 46 G.hns1.02
Van-der-waals TM4 R 121 4x37 G.hns1 K 46 G.hns1.02
Polar H8 N 281 8x47 G.H5 L 376 G.H5.25
Hydrophobic H8 N 281 8x47 G.H5 L 376 G.H5.25
Van-der-waals H8 N 281 8x47 G.H5 L 376 G.H5.25
Hydrophobic TM3 V 107 3x54 G.H5 L 371 G.H5.20
Van-der-waals TM3 V 107 3x54 G.H5 L 371 G.H5.20
Hydrophobic TM3 F 102 3x49 G.H5 Q 377 G.H5.26
Van-der-waals TM3 F 102 3x49 G.H5 Q 377 G.H5.26
Polar ICL2 M 120 34x55 G.hns1 K 46 G.hns1.02
Hydrophobic ICL2 M 120 34x55 G.hns1 K 46 G.hns1.02
Van-der-waals ICL2 M 120 34x55 G.hns1 K 46 G.hns1.02
Polar H8 Q 286 8x52 G.h4s6 Q 339 G.h4s6.13
Hydrophobic H8 Q 286 8x52 G.h4s6 Q 339 G.h4s6.13
Van-der-waals H8 Q 286 8x52 G.h4s6 Q 339 G.h4s6.13
Van-der-waals TM4 R 121 4x37 G.HN R 40 G.HN.49
Polar TM4 R 121 4x37 G.HN K 36 G.HN.45
Hydrophobic TM6 A 226 6x34 G.H5 M 375 G.H5.24
Polar ICL2 M 120 34x55 G.HN T 43 G.HN.52
Hydrophobic ICL2 M 120 34x55 G.HN T 43 G.HN.52
Van-der-waals ICL2 M 120 34x55 G.HN T 43 G.HN.52
Hydrophobic ICL2 M 120 34x55 G.hns1 R 47 G.hns1.03
Van-der-waals ICL2 M 120 34x55 G.hns1 R 47 G.hns1.03
Hydrophobic TM2 L 44 2x39 G.H5 M 375 G.H5.24
Van-der-waals TM2 L 44 2x39 G.H5 M 375 G.H5.24
Hydrophobic TM3 F 102 3x49 G.H5 L 374 G.H5.23
Van-der-waals TM3 F 102 3x49 G.H5 L 374 G.H5.23
Polar TM2 L 44 2x39 G.H5 Q 377 G.H5.26
Hydrophobic TM2 L 44 2x39 G.H5 Q 377 G.H5.26
Van-der-waals TM2 L 44 2x39 G.H5 Q 377 G.H5.26
Polar ICL2 F 115 34x50 G.hns1 R 47 G.hns1.03
Hydrophobic ICL2 F 115 34x50 G.hns1 R 47 G.hns1.03
Van-der-waals ICL2 F 115 34x50 G.hns1 R 47 G.hns1.03