Structure information

M1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

6ZFZ

SPECIES

Homo sapiens

RESOLUTION

2.170

PREFERRED CHAIN

A

PUBLICATION DATE

Oct. 6, 2021

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL3354065 Y82 2.61x60 TM2 hydrophobic
CHEMBL3354065 W91 23.50x50 ECL1 hydrophobic
CHEMBL3354065 D105 3.32x32 TM3 polar (charge-charge)
CHEMBL3354065 Y106 3.33x33 TM3 hydrophobic
CHEMBL3354065 Y404 7.39x38 TM7 hydrophobic
CHEMBL3354065 Y408 7.43x42 TM7 hydrophobic

Ligands

CHEMBL3354065

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

L N G T V T A L S L L G T T I G I F A V 1 L S L A C A D L I I G F T S M N L Y T T Y 2 L L L N M V S A N S A V Y D L A L W L D 3 A A L M I G L A W L V S F V L W A P A I 4 Y L T C M V T V P L Y F A A M A T G F T I 5 S A I L L A F I L T W T P Y N I M V L V 6 M P N I T S N V Y C L W Y G L E W L T 7
Download: PNG | SVG
ICL1 T E L K ICL1ECL1 H W A L ECL1ICL2 P L S Y R A K R ICL2ECL2 E R T V L A G Q C Y I Q F L S ECL2ICL3 Q G S E T P G K G G G S S S S S E R S Q P G A E G S P E T P P G R C C R C C R A P R L L Q A Y S W K E E E E E D E G S M E S L T S S E G E E P G S E V V I K M P M V D P E A Q A P T K Q P P R S S P N T V K R P T K K G R D R A G K G Q K P R G K E Q L A K R K ICL3ECL3 K D C V ECL3N-term M N T S A P P A V S P N I T V L A P G K N-termC-term R W D K R R W R K I P K R P G S V H R T P S R Q C C-term G P W Q V A F I G I T T G L L S L A T V T G N L L V L I S F K V N T V N N Y F L L S L A C A D L I I G T F S M N L Y T T Y L L M G G T L A C D L W L A L D Y V A S N A S V M N L L L I S F D R Y F S V T R T P R R A A L M I G L A W L V S F V L W A P A I L F W Q Y L V G Q P I I T F G T A M A A F Y L P V T V M C T L Y W R I Y R E T E N R A R E L A A L T F S L V K E K K A A R T L S A I L L A F I L T W T P Y N I M V L V S T F C P E T L W E L G Y W L C Y V N S T I N P M C Y A L C N K A F R L F R D T L L L C
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
M1 receptor
TM2
2x60 2.61x60 Y82
ECL1
23x50 23.50x50 W91
TM3
3x32 3.32x32 D105
3x33 3.33x33 Y106
TM7
7x38 7.39x38 Y404
7x42 7.43x42 Y408