Structure information

GPBA receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

7CFM

SPECIES

Homo sapiens

RESOLUTION

3.000

PREFERRED CHAIN

R

PUBLICATION DATE

Sept. 9, 2020

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
P395 L71 2.60x60 TM2 hydrophobic
P395 W75 ECL1 hydrophobic
P395 Y89 3.29x29 TM3 polar (hydrogen bond with backbone)
P395 F96 3.36x36 TM3 hydrophobic
P395 L166 5.39x40 TM5 hydrophobic
P395 L174 5.47x47 TM5 hydrophobic
P395 Y240 6.51x51 TM6 polar (hydrogen bond)
P395 Y251 6.62x62 TM6 hydrophobic

Ligands

P395

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Residue Diagrams

L N A T I I L S A L A L S L G L A G K P 1 L S L L L A G L L T G L A L P T L P G L 2 L L L N A L L S L F S F N P A L Y V L L 3 I R L A L L L T W A G P L L F A S L P A 4 S L F A A A G V A P L L L G Y V E L Y L Y 5 A G A M L L F G L C W G P Y V A T L L L 6 V P V A A A S A S G L S L L S L L T G 7
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ICL1 R R L R ICL1ECL1 W N Q S R R ECL1ICL2 P L Q P P G ICL2ECL2 W N H W T P G A N C S S Q A I F ECL2ICL3 R D E P ICL3ECL3 R P P L ECL3N-term M T P N S T G E V P S P I N-termC-term R C L Q G L W G R A S R D S P G P S I A Y H P S S Q S S V D L D L N C-term P K G A L G L S L A L A S L I I T A N L L L A L G I A W D S P P A G C F F L S L L L A G L L T G L A L P T L P G L G Y W S C L L V Y L A P N F S F L S L L A N L L L V H G E R Y M A V L R S I R L A L L L T W A G P L L F A S L P A L G P A P Y L Y L E V Y G L L L P A V G A A A F L S V R V L A T A H R Q L Q D I C R L E R A V C S A L A R A L T W R Q A R A Q A G A M L L F G L C W G P Y V A T L L L S V L A Y E Q G P G T L L S L L S L G S A S A A A V P V A M G L G D Q R W R A Y T A P A A Q
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Residue Table


GPCRdb(A)
GPCRdb(A)
GPBA receptor
TM2
2x60 2.60x60 L71
TM3
3x29 3.29x29 Y89
3x36 3.36x36 F96
TM5
5x40 5.39x40 L166
5x47 5.47x47 L174
TM6
6x51 6.51x51 Y240
6x62 6.62x62 Y251