Structure information

D1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

7CKW

SPECIES

Homo sapiens

RESOLUTION

3.220

PREFERRED CHAIN

R

PUBLICATION DATE

March 3, 2021

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
fenoldopam D103 3.32x32 TM3 polar (charge-charge)
fenoldopam I104 3.33x33 TM3 hydrophobic
fenoldopam S188 45.52x52 ECL2 polar (hydrogen bond with backbone)
fenoldopam L190 ECL2 hydrophobic
fenoldopam S198 5.42x43 TM5 polar (hydrogen bond)
fenoldopam S199 5.43x44 TM5 polar (hydrogen bond)
fenoldopam S199 5.43x44 TM5 polar (hydrogen bond with backbone)
fenoldopam F288 6.51x51 TM6 aromatic (edge-to-face)
fenoldopam F289 6.52x52 TM6 hydrophobic
fenoldopam N292 6.55x55 TM6 polar (hydrogen bond)
fenoldopam N292 6.55x55 TM6 polar (hydrogen bond)

Ligands

fenoldopam

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

T N G L L T S L I L L S L F C A T L I R 1 I S L A V S D L L V A L V V M P W K A V A 2 V C L N L I S A T S C M I D F A V W I N 3 A F I L I S V A W T L S V L I S F I P V 4 Y T V I M I A V P I Y F S I V S S S I A Y 5 S V I M G V F V C C W L P F F I L N C I 6 I P N L S S N A W G F W V F V D F T N 7
Download: PNG | SVG
ICL1 R H L R S ICL1ECL1 F W P F ECL1ICL2 P F R Y E R K M ICL2ECL2 W H K A K P T S P S D G N A T S L A E T I D N C D S S L ECL2ICL3 T T T G N G K P V E C S Q P E S S F ICL3ECL3 G S G E T Q P F C I ECL3N-term M R T L N T S A M D G T G L V V E R D F N-termC-term C Y R L C P A T N N A I E T V S I N N N G A A M F S S H H E P R G S I S K E C N L V Y L I P H A V G S S E D L K K E E A A G I A R P L E K L S P A L S V I L D Y D T D V S L E K I Q P I T Q N G Q H P T C-term S V R I L T A C F L S L L I L S T L L G N T L V C A A V I R F K V T N F F V I S L A V S D L L V A V L V M P W K A V A E I A G G S F C N I W V A F D I M C S T A S I L N L C V I S V D R Y W A I S S T P K A A F I L I S V A W T L S V L I S F I P V Q L S S R T Y A I S S S V I S F Y I P V A I M I V T Y T R I Y R I A Q K Q I R R I A A L E R A A V H A K N C Q K M S F K R E T K V L K T L S V I M G V F V C C W L P F F I L N C I L P F C D S N T F D V F V W F G W A N S S L N P I I Y A F N A D F S T F R K A L L G
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
D1 receptor
TM3
3x32 3.32x32 D103
3x33 3.33x33 I104
ECL2
45x52 45.52x52 S188
TM5
5x43 5.42x43 S198
5x44 5.43x44 S199
TM6
6x51 6.51x51 F288
6x52 6.52x52 F289
6x55 6.55x55 N292