Structure information

CCR5

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

7F1Q

SPECIES

Homo sapiens

RESOLUTION

2.900

PREFERRED CHAIN

R

PUBLICATION DATE

July 14, 2021

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CCL3 L194 3.22x22 TM3 hydrophobic
CCL3 D341 6.45x45 TM6 polar (charge-assisted hydrogen bond)
CCL3 D341 6.45x45 TM6 polar (charge-charge)
CCL3 I343 6.47x47 TM6 hydrophobic
CCL3 I344 6.48x48 TM6 hydrophobic
CCL3 N347 6.51x51 TM6 polar (hydrogen bond)
CCL3 C351 6.55x55 TM6 polar (hydrogen bond with backbone)
CCL3 L353 6.57x57 TM6 polar (hydrogen bond with backbone)

Ligands

CCL3

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

M N G V F G F I F V L S Y L P P L L R A 1 L N L A I S D L F F L L T V P F W A H Y 2 L I I F F I G S F F G I F Y L G T L L Q 3 G V V T S V I T W V V A V F A S L P G 4 Y C I V M V L L P L V L G L I V I K L T Q 5 F T I M I V Y F L F W A P Y N I V L L L 6 I P N I C C H T M G L T E T V Q M A Q 7
Download: PNG | SVG
ICL1 K R L K ICL1ECL1 Q W D F ECL1ICL2 A V F A L K A R ICL2ECL2 R S Q K E G L H Y T C S S H F P Y S ECL2ICL3 R N E ICL3ECL3 L N ECL3N-term M D Y Q V S S P I Y D I N Y Y T S E P C Q N-termC-term K H I A K R F C K C C S I F Q Q E A P E R A S S V Y T R S T G E Q E I S V G L C-term K I N V K Q I A A R L L P P L Y S L V F I F G F V G N M L V I L I L I N C S M T D I Y L L N L A I S D L F F L L T V P F W A H Y A A A G N T M C Q L L T G L Y F I G F F S G I F F I I L L T I D R Y L A V V H T V T F G V V T S V I T W V V A V F A S L P G I I F T Q Y Q F W K N F Q T L K I V I L G L V L P L L V M V I C Y S G I L K T L L R C K K R H R A V R L I F T I M I V Y F L F W A P Y N I V L L L N T F Q E F F G N C S S S N R L D Q A M Q V T E T L G M T H C C I N P I I Y A F V G E K L L V F R N Y F F Q
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
CCR5
TM3
3x22 3.22x22 N98
TM6
6x45 6.45x45 F245
6x47 6.47x47 F247
6x48 6.48x48 W248
6x51 6.51x51 Y251
6x55 6.55x55 L255
6x57 6.57x57 L257