PDB
7X2C
Resolution
3.2 Å
Released
June 29, 2022
Receptor
D1
Class
A
Species
Homo sapiens
Ligand
fenoldopam
Function
Agonist
Reference
10.1038/S41467-022-30929-W

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file
Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
fenoldopam D103 3.32x32 TM3 polar (charge-assisted hydrogen bond)
fenoldopam I104 3.33x33 TM3 hydrophobic
fenoldopam I104 3.33x33 TM3 Van der Waals
fenoldopam S107 3.36x36 TM3 Van der Waals
fenoldopam S188 45.52x52 ECL2 polar (hydrogen bond with backbone)
fenoldopam S188 45.52x52 ECL2 Van der Waals
fenoldopam L190 ECL2 hydrophobic
fenoldopam L190 ECL2 Van der Waals
fenoldopam S198 5.42x43 TM5 polar (hydrogen bond)
fenoldopam S198 5.42x43 TM5 polar (hydrogen bond with backbone)
fenoldopam F288 6.51x51 TM6 hydrophobic
fenoldopam F288 6.51x51 TM6 Van der Waals
fenoldopam F289 6.52x52 TM6 hydrophobic
fenoldopam F289 6.52x52 TM6 Van der Waals
fenoldopam N292 6.55x55 TM6 Van der Waals
fenoldopam F313 7.35x34 TM7 hydrophobic
fenoldopam W321 7.43x42 TM7 polar (hydrogen bond)

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Snake plot — Download: PNG | SVG
ICL1 R H L R S ICL1ECL1 F W P F ECL1ICL2 P F R Y E R K M ICL2ECL2 W H K A K P T S P S D G N A T S L A E T I D N C D S S L ECL2ICL3 T T T G N G K P V E C S Q P E S S F ICL3ECL3 G S G E T Q P F C I ECL3N-term M R T L N T S A M D G T G L V V E R D F N-termC-term C Y R L C P A T N N A I E T V S I N N N G A A M F S S H H E P R G S I S K E C N L V Y L I P H A V G S S E D L K K E E A A G I A R P L E K L S P A L S V I L D Y D T D V S L E K I Q P I T Q N G Q H P T C-term S V R I L T A C F L S L L I L S T L L G N T L V C A A V I R F K V T N F F V I S L A V S D L L V A V L V M P W K A V A E I A G G S F C N I W V A F D I M C S T A S I L N L C V I S V D R Y W A I S S T P K A A F I L I S V A W T L S V L I S F I P V Q L S S R T Y A I S S S V I S F Y I P V A I M I V T Y T R I Y R I A Q K Q I R R I A A L E R A A V H A K N C Q K M S F K R E T K V L K T L S V I M G V F V C C W L P F F I L N C I L P F C D S N T F D V F V W F G W A N S S L N P I I Y A F N A D F S T F R K A L L G
Helix box plot — Download: PNG | SVG T N G L L T S L I L L S L F C A T L I R 1 I S L A V S D L L V A L V V M P W K A V A 2 V C L N L I S A T S C M I D F A V W I N 3 A F I L I S V A W T L S V L I S F I P V 4 Y T V I M I A V P I Y F S I V S S S I A Y 5 S V I M G V F V C C W L P F F I L N C I 6 I P N L S S N A W G F W V F V D F T N 7

GPCRdb(A)
GPCRdb(A)
D1 receptor
TM3
3x32 3.32x32 D103
3x33 3.33x33 I104
3x36 3.36x36 S107
ECL2
45x52 45.52x52 S188
TM5
5x43 5.42x43 S198
TM6
6x51 6.51x51 F288
6x52 6.52x52 F289
6x55 6.55x55 N292
TM7
7x34 7.35x34 F313
7x42 7.43x42 W321