TA1 receptor - Gs

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gs

G PROTEIN SPECIES

Homo sapiens

PDB CODE

RESOLUTION

3.5 Å

REFERENCE

PUBLICATION DATE

Dec. 27, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

LIGANDS

2-Phenylethanaminium - Agonist pubchem

ENDOGENOUS LIGANDS

β-phenylethylamine, tyramine, 3-iodothyronamine, (+)-Octopamine, CHEMBL1160703, octopamine, dopamine



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

, , , GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type
GPCR
Segment

AA

Number
Generic
number

segment

AA

Number
Generic
number
Hydrophobic ICL2 L 129 - G.H5 I 350 G.H5.15
Hydrophobic ICL2 P 128 - G.H5 I 350 G.H5.15
Van-der-waals ICL2 P 128 - G.H5 I 350 G.H5.15
Hydrophobic ICL2 P 128 - G.H5 R 347 G.H5.12
Van-der-waals ICL2 P 128 - G.H5 R 347 G.H5.12
Hydrophobic TM5 I 224 5x72 G.h4s6 Y 325 G.h4s6.20
Hydrophobic ICL2 L 129 - G.H5 C 346 G.H5.11
Van-der-waals ICL2 L 129 - G.H5 C 346 G.H5.11
Hydrophobic TM3 V 125 3x54 G.H5 H 354 G.H5.19
Van-der-waals TM3 V 125 3x54 G.H5 H 354 G.H5.19
Hydrophobic ICL2 L 129 - G.H5 F 343 G.H5.08
Van-der-waals ICL2 L 129 - G.H5 F 343 G.H5.08
Hydrophobic TM5 I 216 5x64 G.H5 Q 351 G.H5.16
Van-der-waals TM7 F 307 7x56 G.H5 E 359 G.H5.24
Polar TM5 Q 220 5x68 G.H5 R 352 G.H5.17
Hydrophobic TM5 I 213 5x61 G.H5 L 360 G.H5.25
Van-der-waals TM5 I 213 5x61 G.H5 L 360 G.H5.25
Hydrophobic ICL2 L 129 - G.H5 R 347 G.H5.12
Hydrophobic TM3 V 125 3x54 G.H5 L 355 G.H5.20
Hydrophobic TM5 Q 220 5x68 G.H5 L 355 G.H5.20
Hydrophobic H8 P 309 8x48 G.H5 E 359 G.H5.24
Van-der-waals H8 P 309 8x48 G.H5 E 359 G.H5.24
Polar TM3 A 124 3x53 G.H5 H 354 G.H5.19
Hydrophobic TM3 A 124 3x53 G.H5 H 354 G.H5.19
Van-der-waals TM3 A 124 3x53 G.H5 H 354 G.H5.19
Hydrophobic ICL2 K 132 - G.hns1 R 31 G.hns1.02
Hydrophobic TM5 A 217 5x65 G.H5 L 360 G.H5.25
Van-der-waals TM5 A 217 5x65 G.H5 L 360 G.H5.25
Hydrophobic TM3 A 124 3x53 G.H5 Y 358 G.H5.23
Van-der-waals TM3 A 124 3x53 G.H5 Y 358 G.H5.23
Polar H8 W 310 8x49 G.H5 Q 357 G.H5.22
Aromatic TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Hydrophobic TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Van-der-waals TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Hydrophobic ICL2 A 133 - G.hns1 A 32 G.hns1.03
Van-der-waals ICL2 A 133 - G.hns1 A 32 G.hns1.03
Hydrophobic TM5 I 224 5x72 G.H5 R 352 G.H5.17
Van-der-waals TM5 I 224 5x72 G.H5 R 352 G.H5.17
Polar ICL2 R 130 - G.s2s3 D 192 G.s2s3.01
Van-der-waals ICL2 R 130 - G.s2s3 D 192 G.s2s3.01
Hydrophobic ICL2 R 130 - G.S3 V 194 G.S3.01
Hydrophobic TM6 A 249 6x33 G.H5 L 360 G.H5.25
Van-der-waals TM6 A 249 6x33 G.H5 L 360 G.H5.25
Hydrophobic ICL2 P 128 - G.H5 Q 351 G.H5.16
Hydrophobic TM6 L 253 6x37 G.H5 L 360 G.H5.25
Hydrophobic H8 Y 308 8x47 G.H5 E 359 G.H5.24
Hydrophobic ICL2 Y 131 - G.H5 H 354 G.H5.19
Hydrophobic ICL2 P 128 - G.H5 H 354 G.H5.19
Van-der-waals TM5 Q 220 5x68 G.H5 Q 351 G.H5.16
Hydrophobic TM5 Q 220 5x68 G.H5 L 361 G.H5.26
Polar ICL2 L 129 - G.S1 H 34 G.S1.02
Hydrophobic ICL2 L 129 - G.S1 H 34 G.S1.02
Van-der-waals ICL2 L 129 - G.S1 H 34 G.S1.02